RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 FKBP2P26885 142 aaKnown RBP2.16□□□□□ -2.06
TDP1-217ENST00000557782 CMPK1P30085 196 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 TMBIM6P55061 237 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 KRTAP10-12P60413 245 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 RHOGP84095 191 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 NDUFA5Q16718 116 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 EIF5AL1Q6IS14 154 aaKnown RBP2.16□□□□□ -2.06
TDP1-217ENST00000557782 NPCDR1Q9BY65 106 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 OR2H1Q9GZK4 316 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 CACYBPQ9HB71 228 aaKnown RBP2.16□□□□□ -2.06
TDP1-217ENST00000557782 OTORQ9NRC9 128 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 NAT8BQ9UHF3 227 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 PAIP2BQ9ULR5 123 aaKnown RBP2.16□□□□□ -2.06
TDP1-217ENST00000557782 TAF1LQ8IZX4 1826 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 WDR90Q96KV7 1748 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 BIVM-ERCC5R4GMW8 1640 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 PTPRBP23467 1997 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 SCN8AQ9UQD0 1980 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 MYO16Q9Y6X6 1858 aa2.16□□□□□ -2.06
TDP1-217ENST00000557782 ANAPC1Q9H1A4 1944 aa2.15□□□□□ -2.06
TDP1-217ENST00000557782 CCDC88BA6NC98 1476 aa2.15□□□□□ -2.06
TDP1-217ENST00000557782 PRRC2AP48634 2157 aaKnown RBP2.15□□□□□ -2.07
TDP1-217ENST00000557782 TRAV5A0A0B4J249 113 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 IGHV1-18A0A0C4DH31 117 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 RTL8CO15255 209 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 NDUFB3O43676 98 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 METTL15P1P0C7V9 234 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 COX6A1P12074 109 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 HLA-EP13747 358 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 SDC2P34741 201 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 FUSP35637 526 aaKnown RBP eCLIP2.15□□□□□ -2.07
TDP1-217ENST00000557782 ZNF90Q03938 601 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 FAM27BQ5VT28 67 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 PDZD9Q8IXQ8 264 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 OR4E2Q8NGC2 313 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 PRADC1Q9BSG0 188 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 NDUFB11Q9NX14 153 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 NHP2Q9NX24 153 aaKnown RBP2.15□□□□□ -2.07
TDP1-217ENST00000557782 PSORS1C2Q9UIG4 136 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 HSPB8Q9UJY1 196 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 ANKRD31Q8N7Z5 1873 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 BICRAQ9NZM4 1560 aa2.15□□□□□ -2.07
TDP1-217ENST00000557782 NCAPD3P42695 1498 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 A0A1W2PNM2 257 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 ODAMA1E959 279 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 TNFSF15O95150 251 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 CTSGP08311 255 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 CXCL1P09341 107 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 SCTP09683 121 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 FABP2P12104 132 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 ARPP19P56211 112 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 HBBP68871 147 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 MSMO1Q15800 293 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 IGFBP7Q16270 282 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 AAED1Q7RTV5 226 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 DEFB128Q7Z7B8 93 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 WFDC11Q8NEX6 87 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 OR8J3Q8NGG0 315 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 ZNF714Q96N38 554 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 PKMYT1Q99640 499 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 TPT1P8Q9HAU6 139 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 MARCOQ9UEW3 520 aaPredicted RBP2.14□□□□□ -2.07
TDP1-217ENST00000557782 HS3ST2Q9Y278 367 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 SOGA1O94964 1423 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 EEA1Q15075 1411 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 RIC1Q4ADV7 1423 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 NUP98P52948 1817 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 CPAMD8Q8IZJ3 1885 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 GOLGA3Q08378 1498 aa2.14□□□□□ -2.07
TDP1-217ENST00000557782 N4BP2Q86UW6 1770 aaPredicted RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 CFAP43Q8NDM7 1665 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 IGHV1-58A0A0C4DH39 117 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 ODF3BA8MYP8 253 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 C9JAW5 83 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 SDCBPO00560 298 aaPredicted RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 NDUFA2O43678 99 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 HIST1H2BKO60814 126 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 DPM2O94777 84 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 OR2H2O95918 312 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 NAPSAO96009 420 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 IGLV6-57P01721 117 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 IFNA4P05014 189 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 HIST1H2BJP06899 126 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 UBBP0CG47 229 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 DEFA4P12838 97 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 SDC4P31431 198 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 RPL35P42766 123 aaKnown RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 HINT1P49773 126 aaPredicted RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 ERHP84090 104 aaKnown RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 SLC38A11Q08AI6 406 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 VMA21Q3ZAQ7 101 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 MORN2Q502X0 79 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 PRR9Q5T870 116 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 LCN15Q6UWW0 184 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 PHF5AQ7RTV0 110 aaKnown RBP2.13□□□□□ -2.07
TDP1-217ENST00000557782 TCTE3Q8IZS6 198 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 SLC30A7Q8NEW0 376 aa2.13□□□□□ -2.07
TDP1-217ENST00000557782 OR5D16Q8NGK9 328 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms