RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 LINC00322Q6ZN03 302 aaPredicted RBP14.18□□□□□ -0.14
XRCC3-218ENST00000557439 LINC00311Q8N616 119 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 OR1L4Q8NGR5 311 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 TMEM68Q96MH6 324 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 BRS3P32247 399 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 CAMPP49913 170 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 TEX43Q6ZNM6 134 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 THAP8Q8NA92 274 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 NUP35Q8NFH5 326 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 NRN1Q9NPD7 142 aa14.18□□□□□ -0.14
XRCC3-218ENST00000557439 TRBV9A0A0B4J1U6 114 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 IZUMO1RA6ND01 250 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 INS-IGF2F8WCM5 200 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 APCSP02743 223 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 WDR73Q6P4I2 378 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 Q8N976 141 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 OR4A5Q8NH83 315 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 ZNF596Q8TC21 504 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 ASCL2Q99929 193 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 FBXL15Q9H469 300 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 IGHV2-26A0A0B4J1V2 119 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 G0S2P27469 103 aa14.17□□□□□ -0.14
XRCC3-218ENST00000557439 RPL27AP46776 148 aaKnown RBP14.17□□□□□ -0.14
XRCC3-218ENST00000557439 MED13LQ71F56 2210 aa14.16□□□□□ -0.14
XRCC3-218ENST00000557439 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.16□□□□□ -0.14
XRCC3-218ENST00000557439 TCF24Q7RTU0 167 aa14.16□□□□□ -0.14
XRCC3-218ENST00000557439 RNF2Q99496 336 aa14.16□□□□□ -0.14
XRCC3-218ENST00000557439 ZNF331Q9NQX6 463 aaPredicted RBP14.16□□□□□ -0.14
XRCC3-218ENST00000557439 NUTF2P61970 127 aaKnown RBP14.16□□□□□ -0.14
XRCC3-218ENST00000557439 MBD6Q96DN6 1003 aa14.16□□□□□ -0.14
XRCC3-218ENST00000557439 KCNS1Q96KK3 526 aa14.16□□□□□ -0.14
XRCC3-218ENST00000557439 NEU1Q99519 415 aa14.16□□□□□ -0.14
XRCC3-218ENST00000557439 MT-ND6P03923 174 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 ZNF137PP52743 207 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 TBR1Q16650 682 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 ATOH7Q8N100 152 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 VAMP8Q9BV40 100 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 ATRXP46100 2492 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 TRAV8-1A0A0A6YYK1 113 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 HIGD1CA8MV81 97 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 DIRC3C9JPN6 131 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 TCAPO15273 167 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 UBE2G1P62253 170 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 EPDR1Q9UM22 224 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 SIGLEC9Q9Y336 463 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 INSIG2Q9Y5U4 225 aa14.15□□□□□ -0.14
XRCC3-218ENST00000557439 ANKHD1Q8IWZ3 2542 aaKnown RBP14.14□□□□□ -0.15
XRCC3-218ENST00000557439 A6NNC1 897 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 M0R143 59 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 HLA-DQA1P01909 254 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 MC5RP33032 325 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 MYCNOSP40205 109 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 BATFQ16520 125 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 TSKUQ8WUA8 353 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 WNT10AQ9GZT5 417 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 IGHV1-3A0A0C4DH29 117 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 NBEAP1P0C6P0 100 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 LDLRAD2Q5SZI1 272 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 FAM71F2Q6NXP2 309 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 NIT1Q86X76 327 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 SPACA3Q8IXA5 215 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 KIR3DL3Q8N743 410 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 C18orf32Q8TCD1 76 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 C7orf69Q9H7B7 122 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 KAAG1Q9UBP8 84 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 S4R3C0 116 aa14.14□□□□□ -0.15
XRCC3-218ENST00000557439 CRYGCP07315 174 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 RAB4AP20338 218 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 FOXC1Q12948 553 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 ASCL5Q7RTU5 278 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 PERPQ96FX8 193 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 ZNF586Q9NXT0 402 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 FAM90A27PA6NNH2 459 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 ZNF324O75467 553 aaPredicted RBP14.13□□□□□ -0.15
XRCC3-218ENST00000557439 IGLV1-47P01700 117 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 LGALS7P47929 136 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 SSTP61278 116 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 LYZP61626 148 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 LBHQ53QV2 105 aaPredicted RBP14.13□□□□□ -0.15
XRCC3-218ENST00000557439 OR10J3Q5JRS4 329 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 LCN12Q6JVE5 192 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 ZNF835Q9Y2P0 537 aa14.13□□□□□ -0.15
XRCC3-218ENST00000557439 HRNRQ86YZ3 2850 aaPredicted RBP14.12□□□□□ -0.15
XRCC3-218ENST00000557439 VSTM5A8MXK1 200 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 C3orf79P0CE67 100 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 MAJINQ3KP22 176 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 C8orf31Q8N9H6 132 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 RALYQ9UKM9 306 aaKnown RBP14.12□□□□□ -0.15
XRCC3-218ENST00000557439 IGF2RP11717 2491 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 TEX22C9J3V5 150 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 M0QZ24 198 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 CRYGBP07316 175 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 RPL19P84098 196 aaKnown RBP14.12□□□□□ -0.15
XRCC3-218ENST00000557439 TMEM183BQ1AE95 376 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 OR2D3Q8NGH3 330 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 GRAMD2BQ96HH9 432 aa14.12□□□□□ -0.15
XRCC3-218ENST00000557439 A0A1W2PRD5 423 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 A0A1W2PRF3 423 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 A0A1W2PRM7 423 aa14.11□□□□□ -0.15
XRCC3-218ENST00000557439 BUB1B-PAK6H3BSN5 160 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms