RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FAM90A26D6RGX4 464 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 PSG1P11464 419 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 KLF9Q13886 244 aaPredicted RBP11.49□□□□□ -0.57
TUBB3-213ENST00000557262 SMCO1Q147U7 214 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 DYNC2LI1Q8TCX1 351 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 C1QTNF4Q9BXJ3 329 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 PRR13Q9NZ81 148 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 HSPB7Q9UBY9 170 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 RSL24D1Q9UHA3 163 aaKnown RBP11.49□□□□□ -0.57
TUBB3-213ENST00000557262 SHPKQ9UHJ6 478 aa11.49□□□□□ -0.57
TUBB3-213ENST00000557262 TRAV10A0A0B4J240 114 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 AKR1C4P17516 323 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 ATP5IP56385 69 aaPredicted RBP11.48□□□□□ -0.57
TUBB3-213ENST00000557262 LYZL2Q7Z4W2 148 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 LGI3Q8N145 548 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 OR51G1Q8NGK1 321 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 DTD1Q8TEA8 209 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 RAB2BQ8WUD1 216 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 RBKSQ9H477 322 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 CCDC59Q9P031 241 aaKnown RBP11.48□□□□□ -0.57
TUBB3-213ENST00000557262 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
TUBB3-213ENST00000557262 H3BMM0 161 aa11.47□□□□□ -0.57
TUBB3-213ENST00000557262 GPX4P36969 197 aaPredicted RBP11.47□□□□□ -0.57
TUBB3-213ENST00000557262 TMBIM6P55061 237 aa11.47□□□□□ -0.57
TUBB3-213ENST00000557262 SUPT4H1P63272 117 aaKnown RBP11.47□□□□□ -0.57
TUBB3-213ENST00000557262 Q6ZTC4 211 aa11.47□□□□□ -0.57
TUBB3-213ENST00000557262 RNF125Q96EQ8 232 aa11.47□□□□□ -0.57
TUBB3-213ENST00000557262 BCL7BQ9BQE9 202 aa11.47□□□□□ -0.57
TUBB3-213ENST00000557262 MCUBQ9NWR8 336 aa11.47□□□□□ -0.57
TUBB3-213ENST00000557262 ANXA3P12429 323 aa11.46□□□□□ -0.57
TUBB3-213ENST00000557262 TNFSF8P32971 234 aa11.46□□□□□ -0.57
TUBB3-213ENST00000557262 NUP62P37198 522 aaPredicted RBP11.46□□□□□ -0.57
TUBB3-213ENST00000557262 NKX2-1P43699 371 aaPredicted RBP11.46□□□□□ -0.57
TUBB3-213ENST00000557262 SRPXP78539 464 aa11.46□□□□□ -0.57
TUBB3-213ENST00000557262 SOSTQ9BQB4 213 aa11.46□□□□□ -0.57
TUBB3-213ENST00000557262 XCL2Q9UBD3 114 aa11.46□□□□□ -0.57
TUBB3-213ENST00000557262 IGHV4-4A0A075B6R2 117 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 PIGBOS1A0A0B4J2F0 54 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 FABP12A6NFH5 140 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 ZFP92A6NM28 416 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 GAMTQ14353 236 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 OR8G2PQ6IF36 304 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 RNF126Q9BV68 326 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 PBDC1Q9BVG4 233 aa11.45□□□□□ -0.58
TUBB3-213ENST00000557262 SNRPGP15A8MWD9 76 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 HLA-DRB4P13762 266 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 ID1P41134 155 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 ZNF90Q03938 601 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 SLC35E1Q96K37 410 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 SLIRPQ9GZT3 109 aaKnown RBP11.44□□□□□ -0.58
TUBB3-213ENST00000557262 CELA1Q9UNI1 258 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 HLA-DRB4X5D2U9 266 aa11.44□□□□□ -0.58
TUBB3-213ENST00000557262 HECTD4Q9Y4D8 3996 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 HERC2O95714 4834 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 IGKV1D-37A0A075B6S9 117 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 DEFB131BA0A096LNP1 70 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 FABP1P07148 127 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 C1orf194Q5T5A4 169 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 NEU1Q99519 415 aa11.43□□□□□ -0.58
TUBB3-213ENST00000557262 DUXBA0A1W2PPF3 345 aa11.42□□□□□ -0.58
TUBB3-213ENST00000557262 PITX3O75364 302 aa11.42□□□□□ -0.58
TUBB3-213ENST00000557262 FAUP35544 74 aaKnown RBP11.42□□□□□ -0.58
TUBB3-213ENST00000557262 RAB11AP62491 216 aa11.42□□□□□ -0.58
TUBB3-213ENST00000557262 TMEM128Q5BJH2 165 aa11.42□□□□□ -0.58
TUBB3-213ENST00000557262 ZNF705AQ6ZN79 300 aaPredicted RBP11.42□□□□□ -0.58
TUBB3-213ENST00000557262 ZNF767PQ75MW2 155 aa11.42□□□□□ -0.58
TUBB3-213ENST00000557262 LINC00052Q96N35 136 aa11.42□□□□□ -0.58
TUBB3-213ENST00000557262 WDR12Q9GZL7 423 aaKnown RBP11.42□□□□□ -0.58
TUBB3-213ENST00000557262 SMIM9A6NGZ8 99 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 PSMB3P49720 205 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 LYZP61626 148 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 FOXI2Q6ZQN5 318 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 MCFD2Q8NI22 146 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 CLUHP3Q96NS8 147 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 TRGV9Q99603 122 aa11.41□□□□□ -0.58
TUBB3-213ENST00000557262 SAV1Q9H4B6 383 aaPredicted RBP11.41□□□□□ -0.58
TUBB3-213ENST00000557262 ZNF705FA8MVS1 300 aaPredicted RBP11.4□□□□□ -0.58
TUBB3-213ENST00000557262 H3BMQ9 156 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 NOL3O60936 208 aaKnown RBP11.4□□□□□ -0.58
TUBB3-213ENST00000557262 IGKV3-20P01619 116 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 ZNF705DP0CH99 300 aaPredicted RBP11.4□□□□□ -0.58
TUBB3-213ENST00000557262 ZNF705BP0CI00 300 aaPredicted RBP11.4□□□□□ -0.58
TUBB3-213ENST00000557262 SLC25A6P12236 298 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 AP3S2P59780 193 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 DEFB1P60022 68 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 OR2F1Q13607 317 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 LRTM2Q8N967 370 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 PPP1R14BQ96C90 147 aa11.4□□□□□ -0.58
TUBB3-213ENST00000557262 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 SOCS3O14543 225 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 MED6O75586 246 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 AMBPP02760 352 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 SPART-AS1P0CW21 52 aa11.39□□□□□ -0.59
TUBB3-213ENST00000557262 IAPPP10997 89 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms