RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 PIGPP57054 158 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 SPINK9Q5DT21 86 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 ETFRF1Q6IPR1 90 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 ZNF705AQ6ZN79 300 aaPredicted RBP6.21□□□□□ -1.42
VRK1-206ENST00000557222 CCDC71LQ8N9Z2 235 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 ZFAND1Q8TCF1 268 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 GLMPQ8WWB7 406 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 YIPF6Q96EC8 236 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 RRNAD1Q96FB5 475 aaKnown RBP6.21□□□□□ -1.42
VRK1-206ENST00000557222 TP53RKQ96S44 253 aa6.21□□□□□ -1.42
VRK1-206ENST00000557222 MRPL36Q9P0J6 103 aaKnown RBP6.21□□□□□ -1.42
VRK1-206ENST00000557222 FAM90A26D6RGX4 464 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 H3BMM0 161 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 ATP6V1G2O95670 118 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 CD74P04233 296 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 IGLC1P0CG04 106 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 SPART-AS1P0CW21 52 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 PGAM2P15259 253 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 NUP62P37198 522 aaPredicted RBP6.2□□□□□ -1.42
VRK1-206ENST00000557222 NKX2-1P43699 371 aaPredicted RBP6.2□□□□□ -1.42
VRK1-206ENST00000557222 OXA1LQ15070 435 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 IZUMO4Q1ZYL8 232 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 TIGITQ495A1 244 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 RNF212Q495C1 297 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 RNASE10Q5GAN6 216 aaKnown RBP6.2□□□□□ -1.42
VRK1-206ENST00000557222 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 SPATA31B1PQ5VZV4 182 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 PRSS54Q6PEW0 395 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 NOXA1Q86UR1 476 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 TERB2Q8NHR7 220 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 C15orf40Q8WUR7 153 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 ABHD1Q96SE0 405 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 VCX3AQ9NNX9 186 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 NRN1Q9NPD7 142 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.2□□□□□ -1.42
VRK1-206ENST00000557222 CLEC5AQ9NY25 188 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 COPZ2Q9P299 210 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 CELA1Q9UNI1 258 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 LRP1BQ9NZR2 4599 aa6.2□□□□□ -1.42
VRK1-206ENST00000557222 ZNF705FA8MVS1 300 aaPredicted RBP6.19□□□□□ -1.42
VRK1-206ENST00000557222 BUB3O43684 328 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 CDS2O95674 445 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 IFNA21P01568 189 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 ZNF705DP0CH99 300 aaPredicted RBP6.19□□□□□ -1.42
VRK1-206ENST00000557222 ZNF705BP0CI00 300 aaPredicted RBP6.19□□□□□ -1.42
VRK1-206ENST00000557222 HLA-DRB4P13762 266 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 OR10J1P30954 320 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 TGFBR1P36897 503 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 DHODHQ02127 395 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 TRIM16LQ309B1 348 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 SOHLH1Q5JUK2 328 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 SIGLEC15Q6ZMC9 328 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 SNX29P2Q8IUI4 249 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 COMMD3Q9UBI1 195 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 MTFP1Q9UDX5 166 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 HLA-DRB4X5D2U9 266 aa6.19□□□□□ -1.42
VRK1-206ENST00000557222 A0A087WXM4 84 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 M0QYG6 137 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 TOMM40O96008 361 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 IFNA10P01566 189 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 RD3LP0DJH9 198 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 ELK1P19419 428 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 RND2P52198 227 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 ATP5IP56385 69 aaPredicted RBP6.18□□□□□ -1.42
VRK1-206ENST00000557222 FAM3BP58499 235 aaPredicted RBP6.18□□□□□ -1.42
VRK1-206ENST00000557222 MZT2AQ6P582 158 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 Q6ZR54 194 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 SLC24A4Q8NFF2 622 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 RNASE11Q8TAA1 199 aaKnown RBP6.18□□□□□ -1.42
VRK1-206ENST00000557222 TMEM222Q9H0R3 208 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 HEYLQ9NQ87 328 aaPredicted RBP6.18□□□□□ -1.42
VRK1-206ENST00000557222 XCL2Q9UBD3 114 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 RFNGQ9Y644 331 aa6.18□□□□□ -1.42
VRK1-206ENST00000557222 A0A0G2JRQ6 117 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 TEX13DA0A0J9YY54 714 aaPredicted RBP6.17□□□□□ -1.42
VRK1-206ENST00000557222 CD3DP04234 171 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 IL4P05112 153 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 ID1P41134 155 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 RORCP51449 518 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 LSM3P62310 102 aaKnown RBP6.17□□□□□ -1.42
VRK1-206ENST00000557222 SSBP1Q04837 148 aaKnown RBP6.17□□□□□ -1.42
VRK1-206ENST00000557222 SURF2Q15527 256 aaPredicted RBP6.17□□□□□ -1.42
VRK1-206ENST00000557222 USF2Q15853 346 aaPredicted RBP6.17□□□□□ -1.42
VRK1-206ENST00000557222 SP6Q3SY56 376 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 C1orf194Q5T5A4 169 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 SAMD13Q5VXD3 122 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 OR8G2PQ6IF36 304 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 FOXI2Q6ZQN5 318 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 TMEM229BQ8NBD8 167 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 GLYATL2Q8WU03 294 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 AP3S1Q92572 193 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 RBPMSQ93062 196 aaKnown RBP6.17□□□□□ -1.42
VRK1-206ENST00000557222 DKK2Q9UBU2 259 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 KLK11Q9UBX7 282 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 U3KQ87 197 aa6.17□□□□□ -1.42
VRK1-206ENST00000557222 M0R2N4 97 aa6.16□□□□□ -1.42
VRK1-206ENST00000557222 HPGDSO60760 199 aa6.16□□□□□ -1.42
VRK1-206ENST00000557222 PSMB3P49720 205 aa6.16□□□□□ -1.42
VRK1-206ENST00000557222 TAS2R19P59542 299 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms