RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NCBP2LA6PVI3 153 aaKnown RBP3.52□□□□□ -1.85
SRP54-212ENST00000556992 F6UZH7 168 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 FCN1O00602 326 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 NBR2O15453 112 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 IGKV1D-33P01593 117 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 IGKV1-33P01594 117 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 CRYGCP07315 174 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 FBP1P09467 338 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 DEFA4P12838 97 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 OR10J1P30954 320 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 CEBPGP53567 150 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 FGF8P55075 233 aaPredicted RBP3.52□□□□□ -1.85
SRP54-212ENST00000556992 RIPPLY3P57055 190 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 TAS2R45P59539 299 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 B2MP61769 119 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 MEF2BQ02080 365 aaPredicted RBP3.52□□□□□ -1.85
SRP54-212ENST00000556992 PAX8Q06710 450 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 PNRC1Q12796 327 aaPredicted RBP3.52□□□□□ -1.85
SRP54-212ENST00000556992 HES1Q14469 280 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 FXYD3Q14802 87 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 MMDQ15546 238 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 SSX2Q16385 188 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 TMEM241Q24JQ0 296 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 C5orf64Q2M2E5 130 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 MRGPRG-AS1Q2M3A8 158 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 MIC13Q5XKP0 118 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 SLC16A13Q7RTY0 426 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.52□□□□□ -1.85
SRP54-212ENST00000556992 TMEM116Q8NCL8 245 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 STXBP6Q8NFX7 210 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 OR1L4Q8NGR5 311 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 OR2T6Q8NHC8 308 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 GATAD1Q8WUU5 269 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 SSMEM1Q8WWF3 244 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 NPIPB3Q92617 1050 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 ACY3Q96HD9 319 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 BPESC1Q9GZL8 116 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 FBXL15Q9H469 300 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 RPS10P5Q9NQ39 176 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 FUT9Q9Y231 359 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 PUS1Q9Y606 427 aaKnown RBP eCLIP3.52□□□□□ -1.85
SRP54-212ENST00000556992 F11RQ9Y624 299 aaKnown RBP3.52□□□□□ -1.85
SRP54-212ENST00000556992 CADP27708 2225 aa3.52□□□□□ -1.85
SRP54-212ENST00000556992 INTS1Q8N201 2190 aaKnown RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 A0A087WWL8 130 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TCRBV4S1A1TA0A5B7 111 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 ZNF727A8MUV8 499 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 B4DSR2 109 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TEX22C9J3V5 150 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 C11orf94C9JXX5 98 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 E7EUB6 86 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 NPFFO15130 113 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 NUPL2O15504 423 aaKnown RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 PAGE4O60829 102 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 NDUFA3O95167 84 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 NDUFB8O95169 186 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 MT-ND4LP03901 98 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 STAG3L2P0CL84 134 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 STAG3L3P0CL85 134 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 C8orf88P0DMB2 117 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 AREGP15514 252 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 SLC25A16P16260 332 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TMEM11P17152 192 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 PAX6P26367 422 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 CNTFRP26992 372 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 NPBWR1P48145 328 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 DLX1P56177 255 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 CD81P60033 236 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 CX3CL1P78423 397 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 PRB3Q04118 309 aaPredicted RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 GCSAMLQ5JQS6 135 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 C10orf55Q5SWW7 151 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 LDLRAD2Q5SZI1 272 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 CYP2G1PQ6ZSU1 146 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 SSX7Q7RTT5 188 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 LHFPL4Q7Z7J7 247 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 S100A7AQ86SG5 101 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 IQCF2Q8IXL9 164 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TTC9CQ8N5M4 171 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 Q8N6K4 173 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 C15orf54Q8N8G6 183 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 CYB561D1Q8N8Q1 229 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 THAP8Q8NA92 274 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 OR4F5Q8NH21 305 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 OR4X1Q8NH49 305 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 ABHD5Q8WTS1 349 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 TMEM68Q96MH6 324 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 UHRF2Q96PU4 802 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 OR4F4Q96R69 305 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TBX15Q96SF7 602 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 PFDN5Q99471 154 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TRGV9Q99603 122 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 RASL11BQ9BPW5 248 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 SLC25A33Q9BSK2 321 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 TM2D2Q9BX73 214 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 MRPL32Q9BYC8 188 aaKnown RBP3.51□□□□□ -1.85
SRP54-212ENST00000556992 CTDSP1Q9GZU7 261 aa3.51□□□□□ -1.85
SRP54-212ENST00000556992 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms