RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 STAG3L3P0CL85 134 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 SUB1P53999 127 aaKnown RBP eCLIP5.17□□□□□ -1.58
LINC00871-204ENST00000556886 ERHP84090 104 aaKnown RBP5.17□□□□□ -1.58
LINC00871-204ENST00000556886 PAX2Q02962 417 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 TFF3Q07654 80 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 LY6DQ14210 128 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 TMEM241Q24JQ0 296 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 SMUG1Q53HV7 270 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 PRR30Q53SZ7 412 aaPredicted RBP5.17□□□□□ -1.58
LINC00871-204ENST00000556886 WDR25Q64LD2 544 aaPredicted RBP5.17□□□□□ -1.58
LINC00871-204ENST00000556886 ABHD12Q8N2K0 398 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 MUC15Q8N387 334 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 LEAP2Q969E1 77 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 BTF3L4Q96K17 158 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 SLC35E1Q96K37 410 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 RNF2Q99496 336 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 GGTLC1Q9BX51 225 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 COMMD5Q9GZQ3 224 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 RAB1BQ9H0U4 201 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 NDUFA4L2Q9NRX3 87 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 DCAF16Q9NXF7 216 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 MIOXQ9UGB7 285 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 WASHC3Q9Y3C0 194 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 PYGO1Q9Y3Y4 419 aa5.17□□□□□ -1.58
LINC00871-204ENST00000556886 HCFC1P51610 2035 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 A0A1W2PPE3 182 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 CLN5O75503 358 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 YIF1AO95070 293 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 CA2P00918 260 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 IGHV2-70P01814 119 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 OPN1MWP04001 364 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 FBP1P09467 338 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 OPN1MW2P0DN77 364 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 OPN1MW3P0DN78 364 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 IGHV1-8P0DP01 117 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 CCL3L1P16619 93 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 GNG10P50151 68 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 FGF8P55075 233 aaPredicted RBP5.16□□□□□ -1.58
LINC00871-204ENST00000556886 RHOBP62745 196 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 RPL8P62917 257 aaKnown RBP5.16□□□□□ -1.58
LINC00871-204ENST00000556886 HLA-DRB5Q30154 266 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 VMA21Q3ZAQ7 101 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 C14orf177Q52M58 125 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 LYPD2Q6UXB3 125 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 SSX7Q7RTT5 188 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 TGIF2LYQ8IUE0 185 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 TGIF2LXQ8IUE1 241 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 VKORC1L1Q8N0U8 176 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 OR10X1Q8NGY0 326 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 RNASEH2CQ8TDP1 164 aaKnown RBP5.16□□□□□ -1.58
LINC00871-204ENST00000556886 H1FXQ92522 213 aaKnown RBP5.16□□□□□ -1.58
LINC00871-204ENST00000556886 TMEM133Q9H2Q1 129 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 DOK5Q9P104 306 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 CTSZQ9UBR2 303 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 AMMECR1Q9Y4X0 333 aaPredicted RBP5.16□□□□□ -1.58
LINC00871-204ENST00000556886 PXMP4Q9Y6I8 212 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 ATMQ13315 3056 aa5.16□□□□□ -1.58
LINC00871-204ENST00000556886 KMT2BQ9UMN6 2715 aaPredicted RBP5.16□□□□□ -1.58
LINC00871-204ENST00000556886 IGSF10Q6WRI0 2623 aa5.15□□□□□ -1.58
LINC00871-204ENST00000556886 RAI1Q7Z5J4 1906 aaPredicted RBP5.15□□□□□ -1.58
LINC00871-204ENST00000556886 TRBV24-1A0A075B6N3 115 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 IGHV4-4A0A075B6R2 117 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 A0A1W2PPQ1 181 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 SRRM4A7MD48 611 aaKnown RBP5.15□□□□□ -1.59
LINC00871-204ENST00000556886 PPP1R2P9O14990 202 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 FCN3O75636 299 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 IGLV1-47P01700 117 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 IGHV3-7P01780 117 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 S100A8P05109 93 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 S100A6P06703 90 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 SAA1P0DJI8 122 aaPredicted RBP5.15□□□□□ -1.59
LINC00871-204ENST00000556886 IGHV4-31P0DP07 118 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 RNASE2P10153 161 aaKnown RBP5.15□□□□□ -1.59
LINC00871-204ENST00000556886 CD99P14209 185 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 AREGP15514 252 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 B2MP61769 119 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 SELENOTP62341 195 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 ELOBQ15370 118 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 AKIRIN2Q53H80 203 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 SPINK9Q5DT21 86 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 UTF1Q5T230 341 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 PVRIGQ6DKI7 326 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 ETFRF1Q6IPR1 90 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 PRR27Q6MZM9 219 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 ZNF841Q6ZN19 808 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 MMD2Q8IY49 270 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 ZCCHC24Q8N2G6 241 aaKnown RBP5.15□□□□□ -1.59
LINC00871-204ENST00000556886 C11orf42Q8N5U0 333 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 FAM24BQ8N5W8 94 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 LY6G5BQ8NDX9 201 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 OR8B3Q8NGG8 313 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 TIMD4Q96H15 378 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 OR8B2Q96RD0 313 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 MGST2Q99735 147 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 ASCL2Q99929 193 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 SMIM7Q9BQ49 75 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 TCEAL7Q9BRU2 100 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 C20orf24Q9BUV8 137 aa5.15□□□□□ -1.59
LINC00871-204ENST00000556886 MRPL20Q9BYC9 149 aaKnown RBP5.15□□□□□ -1.59
LINC00871-204ENST00000556886 SLC25A22Q9H936 323 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms