RNA–Protein interactions for RNA: ENST00000556869.1

LINC00871-203, long intergenic non-protein coding RNA 871, humanhuman

TSL 2

Gene LINC00871, Length 456 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-203ENST00000556869 C2orf50Q96LR7 162 aa0.39□□□□□ -2.35
LINC00871-203ENST00000556869 PARD6GQ9BYG4 376 aaPredicted RBP0.39□□□□□ -2.35
LINC00871-203ENST00000556869 TRIM4Q9C037 500 aa0.39□□□□□ -2.35
LINC00871-203ENST00000556869 RNASE7Q9H1E1 156 aaKnown RBP0.39□□□□□ -2.35
LINC00871-203ENST00000556869 ADCY9O60503 1353 aa0.39□□□□□ -2.35
LINC00871-203ENST00000556869 ROBO3Q96MS0 1386 aa0.39□□□□□ -2.35
LINC00871-203ENST00000556869 CASP8AP2Q9UKL3 1982 aa0.39□□□□□ -2.35
LINC00871-203ENST00000556869 SCN10AQ9Y5Y9 1956 aa0.39□□□□□ -2.35
LINC00871-203ENST00000556869 HEATR1Q9H583 2144 aaKnown RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 CNTRLQ7Z7A1 2325 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 MED1Q15648 1581 aaPredicted RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 NEO1Q92859 1461 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 TCRBV4S1A1TA0A5B7 111 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 J3QRK9 145 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 KPNA3O00505 521 aaPredicted RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 CCL16O15467 120 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 C8GP07360 202 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 SRP14P37108 136 aaKnown RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 AESQ08117 197 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 IAH1Q2TAA2 248 aaPredicted RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 C12orf74Q32Q52 190 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 LINC00322Q6ZN03 302 aaPredicted RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 LCA10Q71F78 164 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 OTUD6BQ8N6M0 293 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 OR52L1Q8NGH7 329 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 PPP1R14BQ96C90 147 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 PRADC1Q9BSG0 188 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.38□□□□□ -2.35
LINC00871-203ENST00000556869 TVP23BQ9NYZ1 205 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 PRELID3BQ9Y3B1 194 aa0.38□□□□□ -2.35
LINC00871-203ENST00000556869 MCM3APO60318 1980 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 MYH10P35580 1976 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 ASCC3Q8N3C0 2202 aaKnown RBP0.37□□□□□ -2.35
LINC00871-203ENST00000556869 RTL1A6NKG5 1358 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 TRBV6-4A0A1B0GX49 114 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 TLCD2A6NGC4 264 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 PDE6DO43924 150 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 ZNF682O95780 498 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 DHFRP00374 187 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 AP3S2P59780 193 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 DYNLT1P63172 113 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 LYRM7Q5U5X0 104 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 Q6Q795 121 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 ITFG2Q969R8 447 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 ADAT3Q96EY9 351 aaPredicted RBP0.37□□□□□ -2.35
LINC00871-203ENST00000556869 GPER1Q99527 375 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 NOSIPQ9Y314 301 aaKnown RBP0.37□□□□□ -2.35
LINC00871-203ENST00000556869 PEAK1Q9H792 1746 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 SCN8AQ9UQD0 1980 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 SBF1O95248 1867 aa0.37□□□□□ -2.35
LINC00871-203ENST00000556869 ADGRB2O60241 1585 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 IGHV1-58A0A0C4DH39 117 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 SMIM9A6NGZ8 99 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 TIMM17BO60830 172 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 CD2P06729 351 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 EDDM3AQ14507 147 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 C2orf82Q6UX34 121 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 OR8J2Q8NGG1 315 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 OR51A2Q8NGJ7 313 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 PARVGQ9HBI0 331 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 GLTPQ9NZD2 209 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 ORMDL1Q9P0S3 153 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 TNFSF18Q9UNG2 199 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 CHD3Q12873 2000 aaKnown RBP0.36□□□□□ -2.35
LINC00871-203ENST00000556869 PIK3C2GO75747 1445 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 E9PCH4 1651 aa0.36□□□□□ -2.35
LINC00871-203ENST00000556869 TCRBP04435 133 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 SRIP30626 198 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 LSM6P62312 80 aaKnown RBP0.35□□□□□ -2.35
LINC00871-203ENST00000556869 RANP62826 216 aaKnown RBP0.35□□□□□ -2.35
LINC00871-203ENST00000556869 SRSF6Q13247 344 aaKnown RBP0.35□□□□□ -2.35
LINC00871-203ENST00000556869 KRR1Q13601 381 aaKnown RBP0.35□□□□□ -2.35
LINC00871-203ENST00000556869 SPA17Q15506 151 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 Q8IYB0 196 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 C12orf45Q8N5I9 185 aaPredicted RBP0.35□□□□□ -2.35
LINC00871-203ENST00000556869 TP53RKQ96S44 253 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 UCK1Q9HA47 277 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 NCOA1Q15788 1441 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 RIMBP3CA6NJZ7 1639 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 RIMBP3BA6NNM3 1639 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 RIMBP3Q9UFD9 1639 aa0.35□□□□□ -2.35
LINC00871-203ENST00000556869 KIAA1549Q9HCM3 1950 aa0.34□□□□□ -2.35
LINC00871-203ENST00000556869 TMEM114B3SHH9 223 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 NUPR1O60356 82 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 CST8O60676 142 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 ERP29P30040 261 aaKnown RBP0.34□□□□□ -2.36
LINC00871-203ENST00000556869 CDKN2CP42773 168 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 HIST1H3AP68431 136 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 H3F3AP84243 136 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 TMEM97Q5BJF2 176 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 TEN1Q86WV5 123 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 PDZD9Q8IXQ8 264 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 PLPP5Q8NEB5 264 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 OR11H6Q8NGC7 330 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 STAG3L4Q8TBR4 150 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 KIFC1Q9BW19 673 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 PSTPIP2Q9H939 334 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 NIT2Q9NQR4 276 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 IDI2-AS1Q9NZ38 188 aa0.34□□□□□ -2.36
LINC00871-203ENST00000556869 CHCHD2Q9Y6H1 151 aaPredicted RBP0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms