RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 PPP1R27Q86WC6 154 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 C1orf158Q8N1D5 194 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OSR2Q8N2R0 312 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 MUC15Q8N387 334 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 SPICQ8N5J4 248 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 TPRX1Q8N7U7 411 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 DUSP18Q8NEJ0 188 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OR52L1Q8NGH7 329 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OR1S2Q8NGQ3 325 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF418Q8TF45 676 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 CYGBQ8WWM9 190 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 PTX4Q96A99 478 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 LRRC58Q96CX6 371 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 AURKBQ96GD4 344 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 HYLS1Q96M11 299 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 CCDC115Q96NT0 180 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 NRIP2Q9BQI9 281 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 WFDC6Q9BQY6 131 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 SH3BGRL3Q9H299 93 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 FGF20Q9NP95 211 aaPredicted RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 EXOSC4Q9NPD3 245 aaKnown RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 ACOT13Q9NPJ3 140 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 MMP26Q9NRE1 261 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 CBLN4Q9NTU7 201 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 EHFQ9NZC4 300 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 MRPL27Q9P0M9 148 aaKnown RBP2.93□□□□□ -1.94
PRPF39-209ENST00000556353 NAT8Q9UHE5 227 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 OR51B2Q9Y5P1 312 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 SACSQ9NZJ4 4579 aa2.93□□□□□ -1.94
PRPF39-209ENST00000556353 IGKV2-28A0A075B6P5 120 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TRAV36DV7A0A075B6V5 113 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TMED7-TICAM2A0A0A6YYA0 188 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 DAPL1A0PJW8 107 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 RPL36A-HNRNPH2H7BZ11 118 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 J3KT08 172 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TRAF3IP2O43734 574 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ENSAO43768 121 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ATP5LO75964 103 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 SOX14O95416 240 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 CPSF4O95639 269 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 GCGP01275 180 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 IGKV2D-28P01615 120 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 SERPINE1P05121 402 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 CECR9P0C854 216 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 GKN3PP0CG01 181 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ESDP10768 282 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 RCC1P18754 421 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 MYL9P24844 172 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 CDK2P24941 298 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 GZMMP51124 257 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 HCCSP53701 268 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TMBIM6P55061 237 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 EIF5AP63241 154 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 HOXC5Q00444 222 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 MXD1Q05195 221 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ST3GAL4Q11206 333 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 DAZ2Q13117 558 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 GNMTQ14749 295 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 OR8B8Q15620 311 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ACOT6Q3I5F7 207 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 MESTQ5EB52 335 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 DMRTC1Q5HYR2 192 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TMEM255AQ5JRV8 349 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 LDLRAD2Q5SZI1 272 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 FAM120AOSQ5T036 256 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 KDM4DQ6B0I6 523 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 SFXN4Q6P4A7 337 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 PRSS54Q6PEW0 395 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 SNX29P2Q8IUI4 249 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 MSRB3Q8IXL7 192 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ZCCHC24Q8N2G6 241 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TMEM86BQ8N661 226 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 TCTEX1D1Q8N7M0 179 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 C15orf54Q8N8G6 183 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 OR2K2Q8NGT1 345 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 MAL2Q969L2 176 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 BORCS7Q96B45 105 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 FGGYQ96C11 551 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ISOC1Q96CN7 298 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 DDIT4LQ96D03 193 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 DIRAS2Q96HU8 199 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 LINC00052Q96N35 136 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 AGMATQ9BSE5 352 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 SUCNR1Q9BXA5 334 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 ZNF436Q9C0F3 470 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 BPESC1Q9GZL8 116 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 IFI27L2Q9H2X8 130 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 DAZ3Q9NR90 486 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 LYRM2Q9NU23 88 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 AIG1Q9NVV5 245 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 COMMD9Q9P000 198 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 MARCOQ9UEW3 520 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 HDGFL3Q9Y3E1 203 aa2.92□□□□□ -1.94
PRPF39-209ENST00000556353 HUWE1Q7Z6Z7 4374 aaKnown RBP2.92□□□□□ -1.94
PRPF39-209ENST00000556353 IGHV2OR16-5A0A0B4J2B6 119 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 A0A0G2JLM5 398 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 A0A1B0GV50 99 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 TMEM269A0A1B0GVZ9 245 aa2.91□□□□□ -1.94
PRPF39-209ENST00000556353 FAM74A7A6NL05 159 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms