RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 SNCAP37840 140 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 RAB11AP62491 216 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 EIF5AP63241 154 aaKnown RBP4.89□□□□□ -1.63
LINC00643-203ENST00000555518 CFHR3Q02985 330 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 BTNL8Q6UX41 500 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM182Q6ZP80 229 aaPredicted RBP4.89□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM144Q7Z5S9 345 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 Q8N2B8 174 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM86BQ8N661 226 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 THAP8Q8NA92 274 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 OR2G3Q8NGZ4 309 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 OR2T6Q8NHC8 308 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 PCNPQ8WW12 178 aaKnown RBP4.89□□□□□ -1.63
LINC00643-203ENST00000555518 CACNG8Q8WXS5 425 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 ZNF414Q96IQ9 312 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 MGST2Q99735 147 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 PSMG3Q9BT73 122 aaPredicted RBP4.89□□□□□ -1.63
LINC00643-203ENST00000555518 NPCDR1Q9BY65 106 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 ZNF702PQ9H963 129 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 PARP11Q9NR21 331 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 UBQLN2Q9UHD9 624 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 TIMM9Q9Y5J7 89 aa4.89□□□□□ -1.63
LINC00643-203ENST00000555518 YIF1AO95070 293 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 NDUFB8O95169 186 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 MT-CO2P00403 227 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 IFNA5P01569 189 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 CD99P14209 185 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 FGF7P21781 194 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 FHITP49789 147 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 SULT1A2P50226 295 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 SUB1P53999 127 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00643-203ENST00000555518 DEFA5Q01523 94 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 ECSCRQ19T08 205 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 AKIRIN2Q53H80 203 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 CLLU1Q5K131 121 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 ACSM6Q6P461 480 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 UNQ5815/PRO19632Q6UWF5 114 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 SLC35E3Q7Z769 313 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM116Q8NCL8 245 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 OR5T1Q8NG75 326 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 GNPNAT1Q96EK6 184 aaPredicted RBP4.88□□□□□ -1.63
LINC00643-203ENST00000555518 TMEM68Q96MH6 324 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 NOL4LQ96MY1 436 aaPredicted RBP4.88□□□□□ -1.63
LINC00643-203ENST00000555518 GGTLC1Q9BX51 225 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 VSIRQ9H7M9 311 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 TNFRSF19Q9NS68 423 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 LINC00527Q9UJ94 153 aa4.88□□□□□ -1.63
LINC00643-203ENST00000555518 IGHV3-21A0A0B4J1V1 117 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 TRAV41A0A0B4J266 112 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 SMCO3A2RU48 225 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 PSMB11A5LHX3 300 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 BTBD17A6NE02 478 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 MFSD2BA6NFX1 497 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 CLDN34H7C241 214 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 CORTO00230 105 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 MPDU1O75352 247 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 BRI3O95415 125 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 IGKV1-17P01599 117 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 IGHV3-48P01763 117 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 LINC00869P0C866 280 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 IGLC1P0CG04 106 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 HNF1AP20823 631 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 SRP14P37108 136 aaKnown RBP4.87□□□□□ -1.63
LINC00643-203ENST00000555518 OPRK1P41145 380 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 RND2P52198 227 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 SUMO2P61956 95 aaKnown RBP4.87□□□□□ -1.63
LINC00643-203ENST00000555518 ZNF726P1Q15940 193 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 GCSAMLQ5JQS6 135 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 MIC13Q5XKP0 118 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 SLC25A24Q6NUK1 477 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 SSX7Q7RTT5 188 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 OR1L6Q8NGR2 347 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 OR4X1Q8NH49 305 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 LYPD6BQ8NI32 183 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 NPIPB3Q92617 1050 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 SLC35E1Q96K37 410 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 CXorf58Q96LI9 332 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 DUX5Q96PT3 197 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 NPVFQ9HCQ7 196 aa4.87□□□□□ -1.63
LINC00643-203ENST00000555518 C2CD3Q4AC94 2353 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 MAST4O15021 2626 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 LINC00862A6NCI5 91 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 INAFM1C9JVW0 142 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 H3BUA1 57 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 AGPAT2O15120 278 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 CLN5O75503 358 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 OR2J3O76001 311 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 DEFA4P12838 97 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 SRD5A1P18405 259 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 GATA2P23769 480 aaPredicted RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 OR10J1P30954 320 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 FCGR2BP31994 310 aaPredicted RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 CAMLGP49069 296 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 HILS1P60008 231 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 RAB2AP61019 212 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 SERF2P84101 59 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 AKR1C1Q04828 323 aa4.86□□□□□ -1.63
LINC00643-203ENST00000555518 KIAA0141Q14154 515 aaPredicted RBP4.86□□□□□ -1.63
LINC00643-203ENST00000555518 C9orf152Q5JTZ5 239 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms