RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ATG5Q9H1Y0 275 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SH3BGRL3Q9H299 93 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 HIVEP2P31629 2446 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 MXRA5Q9NR99 2828 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 TRBV5-7A0A0A0MS05 114 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 A0A0D9SG52 128 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM212A6NML5 194 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SNURFLB1AK76 121 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SLC17A2O00624 439 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 TIMM23O14925 209 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 NPFFO15130 113 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 TNFSF12O43508 249 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 GPR137BO60478 399 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 LMX1BO60663 402 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 IGLV1-44P01699 117 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 PLA2G1BP04054 148 aaKnown RBP2.16□□□□□ -2.06
PRPF39-206ENST00000554429 OR9G9P0C7N8 305 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 IGHV1-2P23083 117 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 CNTFRP26992 372 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 P2RX1P51575 399 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 CACNG7P62955 275 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SLC35A1P78382 337 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SRPXP78539 464 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 OR7A5Q15622 319 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 TDRG1Q3Y452 100 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SLC35E4Q6ICL7 350 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 MARCH3Q86UD3 253 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 TMEM219Q86XT9 240 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SAXO1Q8IYX7 474 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 PAQR4Q8N4S7 273 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-206ENST00000554429 DLX4Q92988 240 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-206ENST00000554429 BORCS7Q96B45 105 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 C9orf85Q96MD7 179 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 OVOL2Q9BRP0 275 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SRXN1Q9BYN0 137 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 SMCO4Q9NRQ5 59 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 CYSLTR1Q9Y271 337 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 ZNF443Q9Y2A4 671 aaPredicted RBP2.16□□□□□ -2.06
PRPF39-206ENST00000554429 MED31Q9Y3C7 131 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 PAM16Q9Y3D7 125 aa2.16□□□□□ -2.06
PRPF39-206ENST00000554429 DSPPQ9NZW4 1301 aa2.15□□□□□ -2.06
PRPF39-206ENST00000554429 C5orf63A6NC05 138 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 RIIAD1A6NNX1 92 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 H7BYZ3 331 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 J3QR89 54 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 FSHBP01225 129 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 HMGN2P05204 90 aaKnown RBP2.15□□□□□ -2.07
PRPF39-206ENST00000554429 NMBP08949 121 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 NHLRC4P0CG21 123 aaPredicted RBP2.15□□□□□ -2.07
PRPF39-206ENST00000554429 PGAM2P15259 253 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ATF1P18846 271 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 NCBP2P52298 156 aaKnown RBP eCLIP2.15□□□□□ -2.07
PRPF39-206ENST00000554429 MMDQ15546 238 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 CEACAM16Q2WEN9 425 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 Q5XG85 94 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 FBXW12Q6X9E4 464 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF627Q7L945 461 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 OR4K13Q8NH42 304 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 GEMIN6Q8WXD5 167 aaKnown RBP2.15□□□□□ -2.07
PRPF39-206ENST00000554429 FMC1Q96HJ9 113 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 SLC25A33Q9BSK2 321 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF747Q9BV97 191 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 CHST6Q9GZX3 395 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 PARP11Q9NR21 331 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 COMMD9Q9P000 198 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ENPP4Q9Y6X5 453 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ARFGEF3Q5TH69 2177 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 FAM236AA0A1B0GUQ0 79 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 FAM236BA0A1B0GV22 79 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 HMGN4O00479 90 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 PI3P19957 117 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 NFYBP25208 207 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ATP6V0CP27449 155 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 RND3P61587 244 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 SRSF3P84103 164 aaKnown RBP2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF117Q03924 483 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ARL16Q0P5N6 197 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 IQCJQ1A5X6 159 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ALG10BQ5I7T1 473 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 FAM201AQ5SY85 155 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 C1QL2Q7Z5L3 287 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ZNF695Q8IW36 515 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 SGPP2Q8IWX5 399 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 OR2T6Q8NHC8 308 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 MUCL1Q96DR8 90 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 SLAMF6Q96DU3 332 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ACY3Q96HD9 319 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 PITX2Q99697 317 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 SOSTQ9BQB4 213 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 GGTLC1Q9BX51 225 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 GABARAPL3Q9BY60 117 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ESM1Q9NQ30 184 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 NDUFB11Q9NX14 153 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 KCNIP1Q9NZI2 227 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 RNF7Q9UBF6 113 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 VAX2Q9UIW0 290 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 LSM2Q9Y333 95 aaKnown RBP2.15□□□□□ -2.07
PRPF39-206ENST00000554429 DYSFO75923 2080 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 ROS1P08922 2347 aa2.15□□□□□ -2.07
PRPF39-206ENST00000554429 CSPG4Q6UVK1 2322 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms