RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 C11orf1Q9H5F2 150 aa8.9□□□□□ -0.98
TMEM253-202ENST00000553744 IGHV3-66A0A0C4DH42 116 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 A0A1W2PS18 150 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 SIX6O95475 246 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 CD5P06127 495 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 FABP1P07148 127 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 HNRNPCP07910 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
TMEM253-202ENST00000553744 PVALBP20472 110 aaPredicted RBP8.89□□□□□ -0.99
TMEM253-202ENST00000553744 DLK1P80370 383 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 USF2Q15853 346 aaPredicted RBP8.89□□□□□ -0.99
TMEM253-202ENST00000553744 FAM90A2PQ658T7 463 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 LILRB2Q8N423 598 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 OR10P1Q8NGE3 313 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 RNF125Q96EQ8 232 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 NARS2Q96I59 477 aaKnown RBP8.89□□□□□ -0.99
TMEM253-202ENST00000553744 WFDC10AQ9H1F0 79 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 C19orf73Q9NVV2 129 aa8.89□□□□□ -0.99
TMEM253-202ENST00000553744 SMCO3A2RU48 225 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 OR4C46A6NHA9 309 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 OR11H12B2RN74 326 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 SSNA1O43805 119 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 CAV2P51636 162 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 RRAS2P62070 204 aaPredicted RBP8.88□□□□□ -0.99
TMEM253-202ENST00000553744 TCF24Q7RTU0 167 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 TMEM144Q7Z5S9 345 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 NMES1Q9C002 83 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 RABAC1Q9UI14 185 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 U3KQE9 123 aa8.88□□□□□ -0.99
TMEM253-202ENST00000553744 IGKV3-7A0A075B6H7 116 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 DEDDO75618 318 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 DFFBO76075 338 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 P2RY1P47900 373 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 BCAP31P51572 246 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 H2BFSP57053 126 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 CYCSP99999 105 aaKnown RBP8.87□□□□□ -0.99
TMEM253-202ENST00000553744 ARL16Q0P5N6 197 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 OR2F1Q13607 317 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 GRAMD2BQ96HH9 432 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 ASCL2Q99929 193 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 PBDC1Q9BVG4 233 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 GGACTQ9BVM4 153 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 TUBA4BQ9H853 241 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 LYRM2Q9NU23 88 aaPredicted RBP8.87□□□□□ -0.99
TMEM253-202ENST00000553744 MGAT4CQ9UBM8 478 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 ALG5Q9Y673 324 aa8.87□□□□□ -0.99
TMEM253-202ENST00000553744 FAM24AA6NFZ4 105 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 CFDP00746 253 aaPredicted RBP8.86□□□□□ -0.99
TMEM253-202ENST00000553744 NHLRC4P0CG21 123 aaPredicted RBP8.86□□□□□ -0.99
TMEM253-202ENST00000553744 NUP62P37198 522 aaPredicted RBP8.86□□□□□ -0.99
TMEM253-202ENST00000553744 EIF2B2P49770 351 aaKnown RBP8.86□□□□□ -0.99
TMEM253-202ENST00000553744 LYZP61626 148 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 PAFAH1B2P68402 229 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 C16orf54Q6UWD8 224 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 SBSPONQ8IVN8 264 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 GLMPQ8WWB7 406 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 FAM110AQ9BQ89 295 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 MS4A6AQ9H2W1 248 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 SRD5A3Q9H8P0 318 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 NPVFQ9HCQ7 196 aa8.86□□□□□ -0.99
TMEM253-202ENST00000553744 TRAV2A0A0B4J234 112 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 IGSF23A1L1A6 192 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 BUB3O43684 328 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 TFPI2P48307 235 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 RPL11P62913 178 aaKnown RBP8.85□□□□□ -0.99
TMEM253-202ENST00000553744 SLC38A11Q08AI6 406 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 RGS21Q2M5E4 152 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 LRRC37A5PQ49AS3 106 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 CYP2G1PQ6ZSU1 146 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 GBGT1Q8N5D6 347 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 BPIFCQ8NFQ6 507 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 UBQLN2Q9UHD9 624 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 PFDN2Q9UHV9 154 aa8.85□□□□□ -0.99
TMEM253-202ENST00000553744 HELTA6NFD8 242 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 E5RGE8 158 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 H0YIZ8 118 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 DNASE2O00115 360 aaPredicted RBP8.84□□□□□ -0.99
TMEM253-202ENST00000553744 CST7O76096 145 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 RLN2P04090 185 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 GATA2P23769 480 aaPredicted RBP8.84□□□□□ -0.99
TMEM253-202ENST00000553744 SULT1A1P50225 295 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 SELENOTP62341 195 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 LINC00322Q6ZN03 302 aaPredicted RBP8.84□□□□□ -0.99
TMEM253-202ENST00000553744 TMEM182Q6ZP80 229 aaPredicted RBP8.84□□□□□ -0.99
TMEM253-202ENST00000553744 STX12Q86Y82 276 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 TMEM252Q8N6L7 170 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 TMEM217Q8N7C4 229 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 STXBP6Q8NFX7 210 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 PPP1R1CQ8WVI7 109 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 CITED4Q96RK1 184 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 OR5AC2Q9NZP5 309 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 SLC45A2Q9UMX9 530 aa8.84□□□□□ -0.99
TMEM253-202ENST00000553744 RBMY1BA6NDE4 496 aaKnown RBP8.83□□□□□ -1
TMEM253-202ENST00000553744 RBMY1EA6NEQ0 496 aaKnown RBP8.83□□□□□ -1
TMEM253-202ENST00000553744 RBMY1DP0C7P1 496 aaKnown RBP8.83□□□□□ -1
TMEM253-202ENST00000553744 S100A11P31949 105 aa8.83□□□□□ -1
TMEM253-202ENST00000553744 AP2S1P53680 142 aaPredicted RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms