RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	TOMM20L	Q6UXN7	152 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686		Q6ZRU5	148 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	CMTM1	Q8IZ96	169 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	SYS1	Q8N2H4	156 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686		Q8N377	158 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR4A4P	Q8NGN8	299 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR10J6P	Q8NGY7	276 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR4S2	Q8NH73	311 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	DCANP1	Q8TF63	244 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	RASL10A	Q92737	203 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	RBPMS	Q93062	196 aa	Known RBP	3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	SOST	Q9BQB4	213 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	DPH3P1	Q9H4G8	78 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	HLA-DRB4	X5D2U9	266 aa		3.87	□□□□□ -1.79
ATXN3-223	ENST00000553686	IGKV1-6	A0A0C4DH72	117 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686		K7EIM0	57 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686		M0R129	80 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	GNG7	O60262	68 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	ADAP1	O75689	374 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	SLC22A5	O76082	557 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	DIRAS3	O95661	229 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	UBB	P0CG47	229 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRAPPC2	P0DI81	140 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRAPPC2B	P0DI82	140 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	DCK	P27707	260 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	TSPO	P30536	169 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	FXYD7	P58549	80 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	TAS2R43	P59537	309 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	B2M	P61769	119 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	ASAH1	Q13510	395 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	YIF1B	Q5BJH7	314 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	SPATA31B1P	Q5VZV4	182 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	C12orf73	Q69YU5	71 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	KCTD9	Q7L273	389 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	C1orf158	Q8N1D5	194 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR8J1	Q8NGP2	316 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	MOB3A	Q96BX8	217 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	METTL26	Q96S19	204 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	VCX	Q9H320	206 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	HRASLS	Q9HDD0	168 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	C12orf4	Q9NQ89	552 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	BET1L	Q9NYM9	111 aa		3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	F11R	Q9Y624	299 aa	Known RBP	3.86	□□□□□ -1.79
ATXN3-223	ENST00000553686	TNXB	P22105	4242 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRBV6-7	A0A0A0MS04	114 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686		A0A0J9YY99	117 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	FABP7	O15540	132 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	IGLV2-8	P01709	118 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	CD36	P16671	472 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	IGFBP3	P17936	291 aa	Predicted RBP	3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	HTR2C	P28335	458 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	P2RY1	P47900	373 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	NPBWR1	P48145	328 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	RPL37A	P61513	92 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	MRPS15	P82914	257 aa	Known RBP	3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	PSG9	Q00887	426 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	VWC2	Q2TAL6	325 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	DNAL1	Q4LDG9	190 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	CGB2	Q6NT52	195 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	ZNF600	Q6ZNG1	722 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	SCX	Q7RTU7	201 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	TPRA1	Q86W33	373 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	DHFR2	Q86XF0	187 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	HS3ST5	Q8IZT8	346 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686		Q8N814	137 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR13F1	Q8NGS4	319 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	C5orf30	Q96GV9	206 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	GINS4	Q9BRT9	223 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	CHAC1	Q9BUX1	264 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	DNAJC4	Q9NNZ3	241 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	AK3	Q9UIJ7	227 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	LY96	Q9Y6Y9	160 aa		3.85	□□□□□ -1.79
ATXN3-223	ENST00000553686	TRBV5-5	A0A0J9YX44	114 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	LRCOL1	A6NCL2	159 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	SNTN	A6NMZ2	147 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686		J3QRE1	110 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	FKBP6	O75344	327 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	NXPH4	O95158	308 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	EVI2A	P22794	236 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	CRYBB3	P26998	211 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	PRDX6	P30041	224 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	TDRG1	Q3Y452	100 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	CCDC58	Q4VC31	144 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR2B11	Q5JQS5	317 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	LHFPL3	Q86UP9	236 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	HSD17B11	Q8NBQ5	300 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR10W1	Q8NGF6	305 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR4B1	Q8NGF8	309 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	OR1L8	Q8NGR8	309 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	TCTEX1D2	Q8WW35	142 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	SLC25A46	Q96AG3	418 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	NRBF2	Q96F24	287 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	CYYR1	Q96J86	154 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	HSD17B10	Q99714	261 aa	Known RBP	3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	CMSS1	Q9BQ75	279 aa	Known RBP	3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	HDHD3	Q9BSH5	251 aa	Predicted RBP	3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	TMEM59	Q9BXS4	323 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	VCX3B	Q9H321	246 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	NDUFA13	Q9P0J0	144 aa		3.84	□□□□□ -1.79
ATXN3-223	ENST00000553686	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	3.84	□□□□□ -1.79

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