RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 ZNF555Q8NEP9 628 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR1S1Q8NH92 325 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 MRPL30Q8TCC3 161 aaKnown RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GALMQ96C23 342 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 YPEL2Q96QA6 119 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SDHCQ99643 169 aaPredicted RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PARP12Q9H0J9 701 aaKnown RBP4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 C20orf85Q9H1P6 137 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SIGLEC8Q9NYZ4 499 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ABRACLQ9P1F3 81 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CKLFQ9UBR5 152 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ORC6Q9Y5N6 252 aa4.17□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TRAV8-7A0A075B6U6 113 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 TRAV30A0A087WSZ9 112 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 A0A0J9YWU9 116 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 HMSDA8MTL9 139 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 RAB29O14966 203 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PPP1R2P9O14990 202 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CA11O75493 328 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PRH1P02810 166 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 IGKV1-16P04430 117 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 MGMTP16455 207 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 EDN2P20800 178 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 S100GP29377 79 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 LGALS7P47929 136 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR10A3P58181 314 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SNRPGP62308 76 aaKnown RBP4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 HERV-K104P63124 156 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PJVKQ0ZLH3 352 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR5I1Q13606 314 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 LINC00322Q6ZN03 302 aaPredicted RBP4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ACOT7LQ6ZUV0 252 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GAPTQ8N292 157 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ZFP41Q8N8Y5 198 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 OR52I1Q8NGK6 324 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PHYHIPLQ96FC7 376 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 CXorf58Q96LI9 332 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 HARBI1Q96MB7 349 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 ABHD1Q96SE0 405 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PBDC1Q9BVG4 233 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PRO1933Q9H354 126 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 GPN1Q9HCN4 374 aaPredicted RBP4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 SCRT2Q9NQ03 307 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PLEKHJ1Q9NW61 149 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 PIPOXQ9P0Z9 390 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 FLVCR2Q9UPI3 526 aa4.16□□□□□ -1.74
SMARCE1P3-201ENST00000553649 NUPR2A6NF83 97 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 NPIPB5A8MRT5 1133 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 H3BUA1 57 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 M0R1X1 148 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SLC17A3O00476 420 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MPPED1O15442 326 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PDCD6O75340 191 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR2A4O95047 310 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TSPAN13O95857 204 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CFDP00746 253 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 HLA-AP01891 365 aaKnown RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 APOA2P02652 100 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SNRPCP09234 159 aaKnown RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 UBBP0CG47 229 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LIMS3P0CW19 117 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LIMS4P0CW20 117 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RAB5AP20339 215 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 AADACP22760 399 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TNFSF8P32971 234 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RPS27AP62979 156 aaKnown RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 EWSR1Q01844 656 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SLC25A30Q5SVS4 291 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR10K2Q6IF99 312 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FAM71F2Q6NXP2 309 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF343Q6P1L6 599 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 RPL22L1Q6P5R6 122 aaKnown RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 CEMP1Q6PRD7 247 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 C6orf201Q7Z4U5 140 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ZNF546Q86UE3 836 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR4C5Q8NGB2 326 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR10D4PQ8NGN7 298 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 HIST1H2BAQ96A08 127 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TP53RKQ96S44 253 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OVOL2Q9BRP0 275 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FAAP24Q9BTP7 215 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GGTLC1Q9BX51 225 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 DUSP21Q9H596 190 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 LYRM2Q9NU23 88 aaPredicted RBP4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 OR1A1Q9P1Q5 309 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SRRM2Q9UQ35 2752 aaKnown RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 TRAV26-1A0A087WT03 109 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 MSGN1A6NI15 193 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PPP5D1E7EU14 171 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 BMPR1BO00238 502 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PHOX2AO14813 284 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 PRAF2O60831 178 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 ADAP1O75689 374 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGHV3-23P01764 117 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SULT1A3P0DMM9 295 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 SULT1A4P0DMN0 295 aa4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 IGFBP3P17936 291 aaPredicted RBP4.14□□□□□ -1.75
SMARCE1P3-201ENST00000553649 GABRB1P18505 474 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms