RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RAP2BP61225 183 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 LAMTOR1Q6IAA8 161 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 STX12Q86Y82 276 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 OR10P1Q8NGE3 313 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 NPIPB3Q92617 1050 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 MBD2Q9UBB5 411 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 SMPXQ9UHP9 88 aa17.68■□□□□ 0.42
TDP1-205ENST00000553527 TRAV14DV4A0A0A6YYC5 116 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 IGSF23A1L1A6 192 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 P2RY1P47900 373 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 GAMTQ14353 236 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 TOMM20LQ6UXN7 152 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 TMEM252Q8N6L7 170 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 THAP6Q8TBB0 222 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 TM2D3Q9BRN9 247 aa17.67■□□□□ 0.42
TDP1-205ENST00000553527 TRAV30A0A087WSZ9 112 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 IGHV7-4-1A0A0J9YVY3 117 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 SMCO3A2RU48 225 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 RBMY1BA6NDE4 496 aaKnown RBP17.66■□□□□ 0.42
TDP1-205ENST00000553527 RBMY1EA6NEQ0 496 aaKnown RBP17.66■□□□□ 0.42
TDP1-205ENST00000553527 CST7O76096 145 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 RBMY1DP0C7P1 496 aaKnown RBP17.66■□□□□ 0.42
TDP1-205ENST00000553527 OR10J1P30954 320 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 SULT1A1P50225 295 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 AKR1C1Q04828 323 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 FGL1Q08830 312 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 OR1S2Q8NGQ3 325 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 RNF126Q9BV68 326 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 RHPN1-AS1Q9BWJ2 59 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 SLC25A31Q9H0C2 315 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 UBQLN2Q9UHD9 624 aa17.66■□□□□ 0.42
TDP1-205ENST00000553527 PUS1Q9Y606 427 aaKnown RBP eCLIP17.66■□□□□ 0.42
TDP1-205ENST00000553527 IGKV3-7A0A075B6H7 116 aa17.65■□□□□ 0.42
TDP1-205ENST00000553527 IGLC1P0CG04 106 aa17.65■□□□□ 0.42
TDP1-205ENST00000553527 DLK1P80370 383 aa17.65■□□□□ 0.42
TDP1-205ENST00000553527 SLC38A11Q08AI6 406 aa17.65■□□□□ 0.42
TDP1-205ENST00000553527 ZNF600Q6ZNG1 722 aa17.65■□□□□ 0.42
TDP1-205ENST00000553527 RNF2Q99496 336 aa17.65■□□□□ 0.42
TDP1-205ENST00000553527 CHEK1O14757 476 aa17.64■□□□□ 0.41
TDP1-205ENST00000553527 ARL16Q0P5N6 197 aa17.64■□□□□ 0.41
TDP1-205ENST00000553527 TIGITQ495A1 244 aa17.64■□□□□ 0.41
TDP1-205ENST00000553527 TMEM217Q8N7C4 229 aa17.64■□□□□ 0.41
TDP1-205ENST00000553527 SPAG8Q99932 426 aaPredicted RBP17.64■□□□□ 0.41
TDP1-205ENST00000553527 GINS3Q9BRX5 216 aa17.64■□□□□ 0.41
TDP1-205ENST00000553527 hCG_2014768A0A024R1R8 64 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 IGHV3-66A0A0C4DH42 116 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 ZFP92A6NM28 416 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 TSPAN4O14817 238 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 HBG1P69891 147 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 HBG2P69892 147 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 EWSR1Q01844 656 aaKnown RBP eCLIP17.63■□□□□ 0.41
TDP1-205ENST00000553527 LILRB2Q8N423 598 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 OR2T35Q8NGX2 323 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 CHAC2Q8WUX2 184 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 SPATA25Q9BR10 227 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 GGACTQ9BVM4 153 aa17.63■□□□□ 0.41
TDP1-205ENST00000553527 FNDC10F2Z333 226 aa17.62■□□□□ 0.41
TDP1-205ENST00000553527 IGKV1-17P01599 117 aa17.62■□□□□ 0.41
TDP1-205ENST00000553527 APOHP02749 345 aaPredicted RBP17.62■□□□□ 0.41
TDP1-205ENST00000553527 LYL1P12980 280 aa17.62■□□□□ 0.41
TDP1-205ENST00000553527 TFPI2P48307 235 aa17.62■□□□□ 0.41
TDP1-205ENST00000553527 LINC00322Q6ZN03 302 aaPredicted RBP17.62■□□□□ 0.41
TDP1-205ENST00000553527 RETNQ9HD89 108 aa17.62■□□□□ 0.41
TDP1-205ENST00000553527 BAXQ07812 192 aa17.61■□□□□ 0.41
TDP1-205ENST00000553527 GBGT1Q8N5D6 347 aa17.61■□□□□ 0.41
TDP1-205ENST00000553527 THAP8Q8NA92 274 aa17.61■□□□□ 0.41
TDP1-205ENST00000553527 ZFAND3Q9H8U3 227 aa17.61■□□□□ 0.41
TDP1-205ENST00000553527 TENM3Q9P273 2699 aa17.61■□□□□ 0.41
TDP1-205ENST00000553527 NBEAL2Q6ZNJ1 2754 aa17.6■□□□□ 0.41
TDP1-205ENST00000553527 S100A11P31949 105 aa17.6■□□□□ 0.41
TDP1-205ENST00000553527 YPEL3P61236 119 aaPredicted RBP17.6■□□□□ 0.41
TDP1-205ENST00000553527 TMEM144Q7Z5S9 345 aa17.6■□□□□ 0.41
TDP1-205ENST00000553527 ST8SIA2Q92186 375 aa17.6■□□□□ 0.41
TDP1-205ENST00000553527 IGKV1D-37A0A075B6S9 117 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 OR4C46A6NHA9 309 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 FABP1P07148 127 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 RPL12P30050 165 aaKnown RBP17.59■□□□□ 0.41
TDP1-205ENST00000553527 RPL11P62913 178 aaKnown RBP17.59■□□□□ 0.41
TDP1-205ENST00000553527 NHLH2Q02577 135 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 Q5BKY6 102 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 FAM110AQ9BQ89 295 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 NPVFQ9HCQ7 196 aa17.59■□□□□ 0.41
TDP1-205ENST00000553527 IGKV1OR2-108A0A075B7D4 117 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 TOMM40O96008 361 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 NPPCP23582 126 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 TCF24Q7RTU0 167 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 WFDC3Q8IUB2 231 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 OR5C1Q8NGR4 320 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 Q8WTZ3 238 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 CITED4Q96RK1 184 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 TRGV9Q99603 122 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 TMEM147Q9BVK8 224 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 UQCC1Q9NVA1 299 aa17.58■□□□□ 0.4
TDP1-205ENST00000553527 STAB2Q8WWQ8 2551 aa17.57■□□□□ 0.4
TDP1-205ENST00000553527 FXYD6-FXYD2A0A087WZ82 144 aa17.57■□□□□ 0.4
TDP1-205ENST00000553527 RD3LP0DJH9 198 aa17.57■□□□□ 0.4
TDP1-205ENST00000553527 BMI1P35226 326 aa17.57■□□□□ 0.4
TDP1-205ENST00000553527 NUP62P37198 522 aaPredicted RBP17.57■□□□□ 0.4
TDP1-205ENST00000553527 ZNF90Q03938 601 aa17.57■□□□□ 0.4
TDP1-205ENST00000553527 ATP6V1FQ16864 119 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms