RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 TPSG1Q9NRR2 321 aa10.34□□□□□ -0.75
SHMT2-205ENST00000553474 ADGRG4Q8IZF6 3080 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 DOPEY1Q5JWR5 2465 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 LY6LH3BQJ8 138 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 HYPMO75409 117 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 RNF224P0DH78 156 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 TMEM183BQ1AE95 376 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 MORN5Q5VZ52 161 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 REC114Q7Z4M0 266 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 WIPF2Q8TF74 440 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-205ENST00000553474 MISP3Q96FF7 219 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 TIMD4Q96H15 378 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 RITA1Q96K30 269 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 KLF12Q9Y4X4 402 aa10.33□□□□□ -0.76
SHMT2-205ENST00000553474 HELZ2Q9BYK8 2649 aaKnown RBP10.32□□□□□ -0.76
SHMT2-205ENST00000553474 TRAV5A0A0B4J249 113 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 IZUMO1RA6ND01 250 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 C22orf46C9J442 243 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 AMY1AP04745 511 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 COL8A2P25067 703 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 GRNP28799 593 aaKnown RBP10.32□□□□□ -0.76
SHMT2-205ENST00000553474 CEACAM3P40198 252 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 IER3P46695 156 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 RAB4BP61018 213 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 SSBP2P81877 361 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-205ENST00000553474 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 LINC01560Q8TB33 94 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 MS4A10Q96PG2 267 aa10.32□□□□□ -0.76
SHMT2-205ENST00000553474 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
SHMT2-205ENST00000553474 ANKHD1Q8IWZ3 2542 aaKnown RBP10.32□□□□□ -0.76
SHMT2-205ENST00000553474 ZNF705GA8MUZ8 300 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 A8MWP6 167 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 TEX22C9J3V5 150 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 M0R1W7 72 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 PLAUP00749 431 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 RD3LP0DJH9 198 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 PYYP10082 97 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 HIST1H1EP10412 219 aaKnown RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 MGST1P10620 155 aaKnown RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 OR11H6Q8NGC7 330 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 NEU4Q8WWR8 484 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 MRPL36Q9P0J6 103 aaKnown RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 NAT8BQ9UHF3 227 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 EPDR1Q9UM22 224 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 TENM4Q6N022 2769 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 GCN1Q92616 2671 aaKnown RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 IGHV3-72A0A0B4J1Y9 119 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 REG1AP05451 166 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 MFAP2P55001 183 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 UBE2G1P62253 170 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 SRSF1Q07955 248 aaKnown RBP eCLIP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 HCP5Q6MZN7 132 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 TMEM136Q6ZRR5 245 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 S100A7AQ86SG5 101 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 ZNF664Q8N3J9 261 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 C5orf17Q8NAS9 161 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 OR1B1Q8NGR6 318 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 SRSF12Q8WXF0 261 aaKnown RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 MBD6Q96DN6 1003 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 GRAMD2BQ96HH9 432 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 FMC1Q96HJ9 113 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 C14orf144Q96I85 54 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 TMEM14CQ9P0S9 112 aa10.31□□□□□ -0.76
SHMT2-205ENST00000553474 SPTAN1Q13813 2472 aaKnown RBP10.31□□□□□ -0.76
SHMT2-205ENST00000553474 PLXNB1O43157 2135 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 NBEAP1P0C6P0 100 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 ORM2P19652 201 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 HTR1DP28221 377 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 CT83Q5H943 113 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 ATP5L2Q7Z4Y8 100 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 BAGE3Q86Y29 109 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 GPR82Q96P67 336 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 CBLN4Q9NTU7 201 aa10.3□□□□□ -0.76
SHMT2-205ENST00000553474 SIAH2O43255 324 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 GP9P14770 177 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 BRS3P32247 399 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 USF2Q15853 346 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-205ENST00000553474 TPTE2P1Q5T6R2 138 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 C1orf122Q6ZSJ8 110 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 NDUFAF3Q9BU61 184 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 ZNF331Q9NQX6 463 aaPredicted RBP10.29□□□□□ -0.76
SHMT2-205ENST00000553474 SERTAD4Q9NUC0 356 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 DPM3Q9P2X0 92 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 NAGKQ9UJ70 344 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 TP53TG3Q9ULZ0 132 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 HIGD1AQ9Y241 93 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
SHMT2-205ENST00000553474 A1L4Q6 167 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 GRIFINA4D1Z8 144 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 MOSP00540 346 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 SLC25A5P05141 298 aaKnown RBP10.29□□□□□ -0.76
SHMT2-205ENST00000553474 IGLC1P0CG04 106 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 FXYD3Q14802 87 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 MAJINQ3KP22 176 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 NPBQ8NG41 125 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 TSKUQ8WUA8 353 aa10.29□□□□□ -0.76
SHMT2-205ENST00000553474 DOPEY2Q9Y3R5 2298 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms