RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 AP3S2P59780 193 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 DAD1P61803 113 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 KLK9Q2XQG4 91 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 LEMD1Q68G75 181 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 SSX7Q7RTT5 188 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 Q8N3U1 123 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 OR11H4Q8NGC9 324 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 ENKURQ8TC29 256 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 VN1R17PQ8TDU5 208 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 SMIM4Q8WVI0 70 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 FCAMRQ8WWV6 532 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 PINX1Q96BK5 328 aaKnown RBP3.6□□□□□ -1.83
CKAP4-203ENST00000553039 ADTRPQ96IZ2 230 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 SOSTQ9BQB4 213 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 URM1Q9BTM9 101 aaKnown RBP3.6□□□□□ -1.83
CKAP4-203ENST00000553039 VCX2Q9H322 139 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 Q9H3A6 140 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 FNDC4Q9H6D8 234 aaPredicted RBP3.6□□□□□ -1.83
CKAP4-203ENST00000553039 CLEC5AQ9NY25 188 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF581Q9P0T4 197 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 KLK9Q9UKQ9 250 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 RAB22AQ9UL26 194 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 MGAT4AQ9UM21 535 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 LINC00588Q9Y4M8 146 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 RFNGQ9Y644 331 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 S4R3C0 116 aa3.6□□□□□ -1.83
CKAP4-203ENST00000553039 IGHV7-4-1A0A0J9YVY3 117 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 LINC00854A0A1B0GVQ3 168 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 GABARAPH6UMI1 98 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 LYRM1O43325 122 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 CRTAPO75718 401 aaPredicted RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 CD3GP09693 182 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 FAUP35544 74 aaKnown RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 ASIPP42127 132 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 RFX2P48378 723 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 ATP5IP56385 69 aaPredicted RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 BRWD1-AS2P59051 145 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 TAS2R20P59543 309 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 RPS27AP62979 156 aaKnown RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 HERV-K104P63124 156 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 RELQ04864 619 aaPredicted RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 ARL6IP1Q15041 203 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 CDK10Q15131 360 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 HMGN3Q15651 99 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 PHLDA2Q53GA4 152 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 FAM222AQ5U5X8 452 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 GLIPR1L1Q6UWM5 242 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 TCF24Q7RTU0 167 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 COX8CQ7Z4L0 72 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 TRPT1Q86TN4 253 aaKnown RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 NFE4Q86UQ8 179 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 TOMM5Q8N4H5 51 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 VSTM2AQ8TAG5 236 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF502Q8TBZ5 544 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 MRPL30Q8TCC3 161 aaKnown RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 DEDD2Q8WXF8 326 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 NEDD4LQ96PU5 975 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 C7orf50Q9BRJ6 194 aaKnown RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 TMEM59Q9BXS4 323 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 MS4A6AQ9H2W1 248 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 AUNIPQ9H7T9 357 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 ZNF430Q9H8G1 570 aaPredicted RBP3.59□□□□□ -1.83
CKAP4-203ENST00000553039 TAS2R8Q9NYW2 309 aa3.59□□□□□ -1.83
CKAP4-203ENST00000553039 A0A1B0GVG6 124 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 FAM240BA0A1B0GVZ2 78 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 RNF222A6NCQ9 220 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 NAP1L6A6NFF2 107 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 OR2T8A6NH00 312 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM14DPA8MWL7 114 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 BOLA2-SMG1P6H3BVE0 249 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 SULT1C2O00338 296 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 ZNF207O43670 478 aaKnown RBP3.58□□□□□ -1.84
CKAP4-203ENST00000553039 PDCD6O75340 191 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 YIF1AO95070 293 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 MGMTP16455 207 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 PRSS3P35030 304 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 RPL27AP46776 148 aaKnown RBP3.58□□□□□ -1.84
CKAP4-203ENST00000553039 OR2B8PP59922 312 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 QRFPP83859 136 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 UNC119Q13432 240 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 MEF2DQ14814 521 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 OPCMLQ14982 345 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 ACTL10Q5JWF8 245 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 OR10K2Q6IF99 312 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 OR10R2Q8NGX6 335 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 RAB3CQ96E17 227 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 MRPL53Q96EL3 112 aaKnown RBP3.58□□□□□ -1.84
CKAP4-203ENST00000553039 SELENOIQ9C0D9 397 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 COPZ2Q9P299 210 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 C11orf21Q9P2W6 132 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 RABAC1Q9UI14 185 aa3.58□□□□□ -1.84
CKAP4-203ENST00000553039 IGLV11-55A0A075B6I3 123 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 A0A1W2PS18 150 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 ANKRD20A5PA0PJZ0 165 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 TMEM235A6NFC5 223 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 MFSD2BA6NFX1 497 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 F5H768 121 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 L7N2F9 121 aa3.57□□□□□ -1.84
CKAP4-203ENST00000553039 PLA2G10O15496 165 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms