RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 CAV2P51636 162 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 DLK1P80370 383 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 LAMTOR1Q6IAA8 161 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 OR10P1Q8NGE3 313 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 OR51G1Q8NGK1 321 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 NEURL2Q9BR09 285 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 NMES1Q9C002 83 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 MGAT4CQ9UBM8 478 aa10.58□□□□□ -0.72
PTCH1-226ENST00000553011 IGKV3-7A0A075B6H7 116 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 DFFBO76075 338 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 IGHV4-30-4P0DP06 118 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 PVALBP20472 110 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-226ENST00000553011 RGS21Q2M5E4 152 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 LRRC37A5PQ49AS3 106 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 FAM90A2PQ658T7 463 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 TCF24Q7RTU0 167 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 RNF125Q96EQ8 232 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 B9D2Q9BPU9 175 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 LYRM2Q9NU23 88 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-226ENST00000553011 U3KQE9 123 aa10.57□□□□□ -0.72
PTCH1-226ENST00000553011 TENM3Q9P273 2699 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 IGSF23A1L1A6 192 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 H0YIZ8 118 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 DEDDO75618 318 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 CST7O76096 145 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 FABP1P07148 127 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
PTCH1-226ENST00000553011 FRMD6-AS1P0C7T7 363 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 GATA2P23769 480 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-226ENST00000553011 BMI1P35226 326 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 P2RY1P47900 373 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 LYZP61626 148 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 CYCSP99999 105 aaKnown RBP10.56□□□□□ -0.72
PTCH1-226ENST00000553011 TMEM182Q6ZP80 229 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-226ENST00000553011 SPAG8Q99932 426 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-226ENST00000553011 PBDC1Q9BVG4 233 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 DNAH9Q9NYC9 4486 aa10.56□□□□□ -0.72
PTCH1-226ENST00000553011 AGRNO00468 2067 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 A0A1W2PS18 150 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 TFPI2P48307 235 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 SLC38A11Q08AI6 406 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 GBGT1Q8N5D6 347 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 DEFB125Q8N687 156 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 TMEM252Q8N6L7 170 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 TMEM217Q8N7C4 229 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 NARS2Q96I59 477 aaKnown RBP10.55□□□□□ -0.72
PTCH1-226ENST00000553011 ASCL2Q99929 193 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 TMEM231Q9H6L2 316 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 C19orf73Q9NVV2 129 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 OR5AC2Q9NZP5 309 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 RABAC1Q9UI14 185 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 STAB2Q8WWQ8 2551 aa10.55□□□□□ -0.72
PTCH1-226ENST00000553011 OR4C46A6NHA9 309 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 RLN2P04090 185 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 CXCL3P19876 107 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 OXA1LQ15070 435 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 FCN2Q15485 313 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 NBEAL2Q6ZNJ1 2754 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 STPG3Q8N7X2 389 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 PPP1R1CQ8WVI7 109 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 NPVFQ9HCQ7 196 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 UBQLN2Q9UHD9 624 aa10.54□□□□□ -0.72
PTCH1-226ENST00000553011 A8MZ25 164 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 E5RGE8 158 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 EIF2B2P49770 351 aaKnown RBP10.53□□□□□ -0.72
PTCH1-226ENST00000553011 SULT1A1P50225 295 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 RPL11P62913 178 aaKnown RBP10.53□□□□□ -0.72
PTCH1-226ENST00000553011 ODF3L2Q3SX64 289 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 C16orf54Q6UWD8 224 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 CYP2G1PQ6ZSU1 146 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 BPIFCQ8NFQ6 507 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 GLMPQ8WWB7 406 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 GRAMD2BQ96HH9 432 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 GGACTQ9BVM4 153 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 MED28Q9H204 178 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 TUBA4BQ9H853 241 aa10.53□□□□□ -0.72
PTCH1-226ENST00000553011 BUB3O43684 328 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 MPC2O95563 127 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 CD5P06127 495 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 TEPPQ6URK8 271 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 STX12Q86Y82 276 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 SBSPONQ8IVN8 264 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 STXBP6Q8NFX7 210 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 OR11H7Q8NGC8 314 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 RNF126Q9BV68 326 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 MS4A6AQ9H2W1 248 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.73
PTCH1-226ENST00000553011 DNASE2O00115 360 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-226ENST00000553011 CFDP00746 253 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-226ENST00000553011 ORM2P19652 201 aa10.51□□□□□ -0.73
PTCH1-226ENST00000553011 PAFAH1B2P68402 229 aa10.51□□□□□ -0.73
PTCH1-226ENST00000553011 NHLH2Q02577 135 aa10.51□□□□□ -0.73
PTCH1-226ENST00000553011 PPP1R14BQ96C90 147 aa10.51□□□□□ -0.73
PTCH1-226ENST00000553011 CITED4Q96RK1 184 aa10.51□□□□□ -0.73
PTCH1-226ENST00000553011 DOK5Q9P104 306 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms