RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 STAB2Q8WWQ8 2551 aa13□□□□□ -0.33
CDK4-208ENST00000551706 IGHV3-49A0A0A0MS15 119 aa13□□□□□ -0.33
CDK4-208ENST00000551706 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
CDK4-208ENST00000551706 A8MZ25 164 aa13□□□□□ -0.33
CDK4-208ENST00000551706 FNDC10F2Z333 226 aa13□□□□□ -0.33
CDK4-208ENST00000551706 IL4P05112 153 aa13□□□□□ -0.33
CDK4-208ENST00000551706 METTL15P1P0C7V9 234 aa13□□□□□ -0.33
CDK4-208ENST00000551706 PSG1P11464 419 aa13□□□□□ -0.33
CDK4-208ENST00000551706 S100A10P60903 97 aa13□□□□□ -0.33
CDK4-208ENST00000551706 AKR1C1Q04828 323 aa13□□□□□ -0.33
CDK4-208ENST00000551706 OR8G2PQ6IF36 304 aa13□□□□□ -0.33
CDK4-208ENST00000551706 GRAMD2BQ96HH9 432 aa13□□□□□ -0.33
CDK4-208ENST00000551706 RNF2Q99496 336 aa13□□□□□ -0.33
CDK4-208ENST00000551706 NMES1Q9C002 83 aa13□□□□□ -0.33
CDK4-208ENST00000551706 DNAH1Q9P2D7 4330 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 DNAH7Q8WXX0 4024 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 IGKV1D-37A0A075B6S9 117 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 CFDP00746 253 aaPredicted RBP12.99□□□□□ -0.33
CDK4-208ENST00000551706 IGHV4-30-4P0DP06 118 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 DLK1P80370 383 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 RAB32Q13637 225 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 CASC10Q5T4H9 136 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 ST8SIA2Q92186 375 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 GGACTQ9BVM4 153 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 MGAT4CQ9UBM8 478 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 PFDN2Q9UHV9 154 aa12.99□□□□□ -0.33
CDK4-208ENST00000551706 IGHV3OR16-13A0A075B7E8 117 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 IGHV3-74A0A0B4J1X5 117 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 OR4C46A6NHA9 309 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 APOHP02749 345 aaPredicted RBP12.98□□□□□ -0.33
CDK4-208ENST00000551706 HNRNPCP07910 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDK4-208ENST00000551706 CD7P09564 240 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 NUP62P37198 522 aaPredicted RBP12.98□□□□□ -0.33
CDK4-208ENST00000551706 BCAP31P51572 246 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 CAV2P51636 162 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 PAFAH1B2P68402 229 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 ZNF90Q03938 601 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 TMEM144Q7Z5S9 345 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 C11orf1Q9H5F2 150 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 TUBA4BQ9H853 241 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
CDK4-208ENST00000551706 IGKV1OR2-108A0A075B7D4 117 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 SMCO3A2RU48 225 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 SIX6O95475 246 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 RLN2P04090 185 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 FRMD6-AS1P0C7T7 363 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
CDK4-208ENST00000551706 USF2Q15853 346 aaPredicted RBP12.97□□□□□ -0.33
CDK4-208ENST00000551706 NPVFQ9HCQ7 196 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 U3KQE9 123 aa12.97□□□□□ -0.33
CDK4-208ENST00000551706 IGHV3-66A0A0C4DH42 116 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 OR11H12B2RN74 326 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 DEDDO75618 318 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 CCNKO75909 580 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 P2RY1P47900 373 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 RRAS2P62070 204 aaPredicted RBP12.96□□□□□ -0.33
CDK4-208ENST00000551706 LYRM2Q9NU23 88 aaPredicted RBP12.96□□□□□ -0.33
CDK4-208ENST00000551706 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 ALG5Q9Y673 324 aa12.96□□□□□ -0.33
CDK4-208ENST00000551706 DFFBO76075 338 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 CMC4P56277 68 aaPredicted RBP12.95□□□□□ -0.34
CDK4-208ENST00000551706 H2BFSP57053 126 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 RPL11P62913 178 aaKnown RBP12.95□□□□□ -0.34
CDK4-208ENST00000551706 OXA1LQ15070 435 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 STX12Q86Y82 276 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 BPIFCQ8NFQ6 507 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 FAM110AQ9BQ89 295 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 PBDC1Q9BVG4 233 aa12.95□□□□□ -0.34
CDK4-208ENST00000551706 TRAV2A0A0B4J234 112 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 LCE6AA0A183 80 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 HELTA6NFD8 242 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 E5RGE8 158 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 S100A7P31151 101 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 AP2S1P53680 142 aaPredicted RBP12.94□□□□□ -0.34
CDK4-208ENST00000551706 LYZP61626 148 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 SELENOTP62341 195 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 OR2F1Q13607 317 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 LILRB2Q8N423 598 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 TMEM252Q8N6L7 170 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 MUC7Q8TAX7 377 aa12.94□□□□□ -0.34
CDK4-208ENST00000551706 IGKV3-7A0A075B6H7 116 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 FAM24AA6NFZ4 105 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 DNASE2O00115 360 aaPredicted RBP12.93□□□□□ -0.34
CDK4-208ENST00000551706 BUB3O43684 328 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 CST7O76096 145 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 PET100P0DJ07 73 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 S100A11P31949 105 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 SULT1A1P50225 295 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 HBG1P69891 147 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 HBG2P69892 147 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 SLC38A11Q08AI6 406 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 LRRC37A5PQ49AS3 106 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 TEPPQ6URK8 271 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 CYP2G1PQ6ZSU1 146 aa12.93□□□□□ -0.34
CDK4-208ENST00000551706 DEFB125Q8N687 156 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms