RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 HINT2Q9BX68 163 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 RBKSQ9H477 322 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 ENY2Q9NPA8 101 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 ZFP57Q9NU63 452 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 GSKIPQ9P0R6 139 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 LINC00527Q9UJ94 153 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 WSB1Q9Y6I7 421 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 TNCP24821 2201 aa4.91□□□□□ -1.62
DEPDC4-210ENST00000551642 SRRM2Q9UQ35 2752 aaKnown RBP4.9□□□□□ -1.62
DEPDC4-210ENST00000551642 TRBV9A0A0B4J1U6 114 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 PSMB11A5LHX3 300 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 CEBPZOSA8MTT3 80 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 K7EPK0 472 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 CYB5BO43169 146 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 SIX6O95475 246 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 GIPP09681 153 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 APELAP0DMC3 54 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 HIST1H1BP16401 226 aaKnown RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 HOXA1P49639 335 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 SUB1P53999 127 aaKnown RBP eCLIP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 TAS2R30P59541 319 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 RPL36AP83881 106 aaKnown RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 SPINK9Q5DT21 86 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF329Q86UD4 541 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 NOXA1Q86UR1 476 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 OR5T1Q8NG75 326 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 OR5AU1Q8NGC0 362 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 OR1P1Q8NH06 330 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 MYOZ3Q8TDC0 251 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 SMIM8Q96KF7 97 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 CIB3Q96Q77 187 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 RAB40CQ96S21 281 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 P2RX4Q99571 388 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 TM2D3Q9BRN9 247 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF436Q9C0F3 470 aaPredicted RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 C11orf1Q9H5F2 150 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 SLA2Q9H6Q3 261 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 RCL1Q9Y2P8 373 aaKnown RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 F11RQ9Y624 299 aaKnown RBP4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 U3KQ87 197 aa4.9□□□□□ -1.63
DEPDC4-210ENST00000551642 IGLV11-55A0A075B6I3 123 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 FAM223BA6NKX1 122 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 CORTO00230 105 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 WRBO00258 174 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 SSSCA1O60232 199 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 TSC22D2O75157 780 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 REG1AP05451 166 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 PRSS2P07478 247 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 PET100P0DJ07 73 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 RNASE2P10153 161 aaKnown RBP4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 DEFA4P12838 97 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 PVALBP20472 110 aaPredicted RBP4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 SNCAP37840 140 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 RAB9AP51151 201 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 MFAP2P55001 183 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 PAX9P55771 341 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 POLR2GP62487 172 aaKnown RBP eCLIP4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 RPP30P78346 268 aaKnown RBP4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 RBMY1FQ15415 496 aaKnown RBP4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 C2orf83Q53S99 150 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 C10orf99Q6UWK7 81 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 FAM223AQ8IWN6 122 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 NECAP1Q8NC96 275 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 SLC24A4Q8NFF2 622 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 OR4X2Q8NGF9 303 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 PPP1R1CQ8WVI7 109 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 MAGT1Q9H0U3 335 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 THYN1Q9P016 225 aa4.89□□□□□ -1.63
DEPDC4-210ENST00000551642 A0A1B0GUV1 79 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 A0A1B0GVG6 124 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 C15orf62A8K5M9 175 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 E5RGE8 158 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 TNFRSF6BO95407 300 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 MPC2O95563 127 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 TMEM50AO95807 157 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 TRGV3P03979 118 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 RLN2P04090 185 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 IAPPP10997 89 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 NPY1RP25929 384 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 CDX1P47902 265 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 BCAP31P51572 246 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 S100A10P60903 97 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 RPL23AP62750 156 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 RHOGP84095 191 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 FGL1Q08830 312 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 EXOSC2Q13868 293 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 KIAA0141Q14154 515 aaPredicted RBP4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 PRSS54Q6PEW0 395 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF491Q8N8L2 437 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 RNASEH2CQ8TDP1 164 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 TMEM170AQ8WVE7 144 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 USMG5Q96IX5 58 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 UBE2E2Q96LR5 201 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 ATP6V0BQ99437 205 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 RNF126Q9BV68 326 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 GPR61Q9BZJ8 451 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 ZNF355PQ9NSJ1 428 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 PSENENQ9NZ42 101 aa4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 LSM5Q9Y4Y9 91 aaKnown RBP4.88□□□□□ -1.63
DEPDC4-210ENST00000551642 A0A0G2JLM5 398 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms