RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 FCER2P06734 321 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 TAS2R46P59540 309 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 FXYD4P59646 89 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 DLK1P80370 383 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
PTCH1-222ENST00000551425 ZNF79Q15937 498 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 RRN3P1Q2M238 152 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 GDF5OSQ5U4N7 250 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 Q6ZSN1 163 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 TMEM229BQ8NBD8 167 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 OR5AP2Q8NGF4 316 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 TMEM230Q96A57 120 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 ZNF503Q96F45 646 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 SRRQ9GZT4 340 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 NRN1Q9NPD7 142 aa8.29□□□□□ -1.08
PTCH1-222ENST00000551425 LYRM9A8MSI8 78 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 F5H768 121 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 CLN5O75503 358 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 PGLYRP1O75594 196 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-222ENST00000551425 IGKV3-20P01619 116 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-222ENST00000551425 RLN1P04808 185 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 HLA-DMAP28067 261 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 TAS2R19P59542 299 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 CLINT1Q14677 625 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 ZNF846Q147U1 533 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
PTCH1-222ENST00000551425 TMEM17Q86X19 198 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 LYSMD2Q8IV50 215 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 OR5H2Q8NGV7 314 aa8.28□□□□□ -1.08
PTCH1-222ENST00000551425 WDR12Q9GZL7 423 aaKnown RBP8.28□□□□□ -1.08
PTCH1-222ENST00000551425 KRTAP29-1A8MX34 341 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-222ENST00000551425 SCGB2A1O75556 95 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 IGKV1-17P01599 117 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 PMP2P02689 132 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.09
PTCH1-222ENST00000551425 TBPP20226 339 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 HRH1P35367 487 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 INPP1P49441 399 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 AP3S2P59780 193 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 HSPE1P61604 102 aaKnown RBP8.27□□□□□ -1.09
PTCH1-222ENST00000551425 ICAM4Q14773 271 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 SYT8Q8NBV8 401 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 OR4X1Q8NH49 305 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 RNF141Q8WVD5 230 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 C7orf50Q9BRJ6 194 aaKnown RBP8.27□□□□□ -1.09
PTCH1-222ENST00000551425 UPK3BQ9BT76 320 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 SAV1Q9H4B6 383 aaPredicted RBP8.27□□□□□ -1.09
PTCH1-222ENST00000551425 EHFQ9NZC4 300 aa8.27□□□□□ -1.09
PTCH1-222ENST00000551425 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
PTCH1-222ENST00000551425 ANKRD20A5PA0PJZ0 165 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 CORTO00230 105 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 CD3DP04234 171 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 AKAIN1P0CW23 69 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 FUSP35637 526 aaKnown RBP eCLIP8.26□□□□□ -1.09
PTCH1-222ENST00000551425 RFX2P48378 723 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 TSPAN5P62079 268 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 RNASE10Q5GAN6 216 aaKnown RBP8.26□□□□□ -1.09
PTCH1-222ENST00000551425 TRIQKQ629K1 86 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 STEAP1BQ6NZ63 245 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 DHRS11Q6UWP2 260 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 FOXI2Q6ZQN5 318 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 TOMM5Q8N4H5 51 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 OR6F1Q8NGZ6 308 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 OR4A16Q8NH70 328 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 DEDD2Q8WXF8 326 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 CCDC32Q9BV29 185 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 SLC35B3Q9H1N7 401 aa8.26□□□□□ -1.09
PTCH1-222ENST00000551425 INS-IGF2F8WCM5 200 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 EREGO14944 169 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 RAB3DO95716 219 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 ATP5G1P05496 136 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 DEFB130BP0DP73 79 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 DEFB130AP0DP74 79 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 FAUP35544 74 aaKnown RBP8.25□□□□□ -1.09
PTCH1-222ENST00000551425 SNCAP37840 140 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 ATP5G3P48201 142 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 DEFB1P60022 68 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 HERV-K104P61576 105 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 PSG9Q00887 426 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 MEF2DQ14814 521 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 BAK1Q16611 211 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 SPATA31B1PQ5VZV4 182 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 SIGLEC15Q6ZMC9 328 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 TRIM63Q969Q1 353 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 SEC22AQ96IW7 307 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 SDHCQ99643 169 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-222ENST00000551425 MAGT1Q9H0U3 335 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 FNDC4Q9H6D8 234 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-222ENST00000551425 FAM212BQ9NTI7 297 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-222ENST00000551425 ZNF586Q9NXT0 402 aa8.25□□□□□ -1.09
PTCH1-222ENST00000551425 TRAV30A0A087WSZ9 112 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 DISC1C4P0D8 188 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 M0QYG6 137 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 BUB3O43684 328 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 IFNA5P01569 189 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 IL7P13232 177 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 LINC00315P59091 139 aa8.24□□□□□ -1.09
PTCH1-222ENST00000551425 KLF9Q13886 244 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms