RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 RCHY1Q96PM5 261 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 FNDC4Q9H6D8 234 aaPredicted RBP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 BMI1P35226 326 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 SRSF9Q13242 221 aaKnown RBP eCLIP8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 UBE2V1Q13404 147 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 TEX45Q8NA69 505 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 MAP1LC3AQ9H492 121 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 DOPEY2Q9Y3R5 2298 aa8.37□□□□□ -1.07
SMARCC2-209ENST00000550164 IGHV3OR16-13A0A075B7E8 117 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 IGHV3-74A0A0B4J1X5 117 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 Q6ZR03 302 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 PNKDQ8N490 385 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 LTBP2Q14767 1821 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 K7EN84 100 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 SFTPCP11686 197 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 SLAQ13239 276 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 CIARTQ8N365 385 aaPredicted RBP8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 ARFGEF3Q5TH69 2177 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 A0A087X0K7 114 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 PPIAL4GP0DN37 164 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 Q1RN00 199 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 TEX43Q6ZNM6 134 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 STPG4Q8N801 248 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 LOXL4Q96JB6 756 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 KLK15Q9H2R5 256 aa8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 MRPL27Q9P0M9 148 aaKnown RBP8.36□□□□□ -1.07
SMARCC2-209ENST00000550164 KIR2DL5BA0A0G2JN68 375 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 KIR2DL5BA0A0G2JPC4 375 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 IGHV1-46P01743 117 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 IGHV3-23P01764 117 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 SP9P0CG40 484 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 RNASE2P10153 161 aaKnown RBP8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 CD24P25063 80 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 TPTE2P1Q5T6R2 138 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 MRPL52Q86TS9 123 aaKnown RBP8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 KIR2DL5AQ8N109 375 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 EXOC3-AS1Q8N2X6 119 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 MDS2Q8NDY4 140 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 TRBV20OR9-2A0A075B6H5 130 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNF134P52741 427 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 Q6ZVH6 145 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 MGPP08493 103 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 PDLIM4P50479 330 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 MFAP4P55083 255 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 MEF2CQ06413 473 aaPredicted RBP8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 ATP5L2Q7Z4Y8 100 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 ORAOV1Q8WV07 137 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 ZGRF1Q86YA3 2104 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 GOSR1O95249 250 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 ZNF883P0CG24 379 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 RPL7P18124 248 aaKnown RBP8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 RAB1BQ9H0U4 201 aa8.35□□□□□ -1.07
SMARCC2-209ENST00000550164 C17orf100A8MU93 164 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 CACNG7P62955 275 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 MAJINQ3KP22 176 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 SAPCD1Q5SSQ6 148 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 ORMDL3Q8N138 153 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 COX11Q9Y6N1 276 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 BDP1A6H8Y1 2624 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 IGHV1-69-2A0A0G2JMI3 117 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 F2RL2O00254 374 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 IGKV3-15P01624 115 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 FXYD7P58549 80 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 ASCL2Q99929 193 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 OTORQ9NRC9 128 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 TMEM14BQ9NUH8 114 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 TMEM160Q9NX00 188 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 CIDEAO60543 219 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 KRTAP27-1Q3LI81 207 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 RALYQ9UKM9 306 aaKnown RBP8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 SPCS1Q9Y6A9 102 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 C5orf42Q9H799 3197 aa8.34□□□□□ -1.07
SMARCC2-209ENST00000550164 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 BSPH1Q075Z2 132 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 DUX4L9Q6RFH8 374 aaPredicted RBP8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 RASL11AQ6T310 242 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 ZNF295-AS1Q8N0V1 137 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 ZNF502Q8TBZ5 544 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 IGLV2-14P01704 120 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 TCRAP04437 139 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 TMEM78Q5T7P6 136 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 ZNF788Q6ZQV5 615 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 SMIM12Q96EX1 92 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 C1RLQ9NZP8 487 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 PSG8Q9UQ74 426 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 IGHV3-49A0A0A0MS15 119 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 C15orf65H3BRN8 121 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 IGLL1P15814 213 aa8.33□□□□□ -1.08
SMARCC2-209ENST00000550164 RIPPLY3P57055 190 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms