RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 JMJD8Q96S16 334 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 PBDC1Q9BVG4 233 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 MRPL32Q9BYC8 188 aaKnown RBP9.39□□□□□ -0.91
PTPRR-209ENST00000549308 KLK15Q9H2R5 256 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 GNB4Q9HAV0 340 aa9.39□□□□□ -0.91
PTPRR-209ENST00000549308 SEPSECSQ9HD40 501 aaKnown RBP9.39□□□□□ -0.91
PTPRR-209ENST00000549308 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TMEM89A2RUT3 159 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 CLEC3BP05452 202 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
PTPRR-209ENST00000549308 RAB9AP51151 201 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 HILS1P60008 231 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TOR2AQ5JU69 321 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 Q6ZSV7 163 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 MIR17HGQ75NE6 70 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 EIF4E3Q8N5X7 224 aaKnown RBP9.38□□□□□ -0.91
PTPRR-209ENST00000549308 CCDC140Q96MF4 163 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 FAM210AQ96ND0 272 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 EIF5A2Q9GZV4 153 aaKnown RBP9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TREM1Q9NP99 234 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TECRQ9NZ01 308 aaKnown RBP9.38□□□□□ -0.91
PTPRR-209ENST00000549308 GNG13Q9P2W3 67 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 A0A0G2JLM5 398 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TGOLN2O43493 480 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 CXorf1O96002 111 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 IFNA1P01562 189 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 IGHV3-11P01762 117 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 CTSGP08311 255 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 STAG3L2P0CL84 134 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 STAG3L3P0CL85 134 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TAS2R45P59539 299 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 PLP1P60201 277 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 GUK1Q16774 197 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TEX38Q6PEX7 206 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 UQCC3Q6UW78 93 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 C10orf99Q6UWK7 81 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 CHRDL1Q9BU40 450 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TMPRSS5Q9H3S3 457 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 TMEM231Q9H6L2 316 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 HIGD1AQ9Y241 93 aa9.38□□□□□ -0.91
PTPRR-209ENST00000549308 ACANP16112 2415 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 RBFOX3A6NFN3 312 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 I3L521 148 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 IL4P05112 153 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 ELANEP08246 267 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 ARL14EPLP0DKL9 152 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 C8orf88P0DMB2 117 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 PSMB8P28062 276 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 FOXE3Q13461 319 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 PEA15Q15121 130 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 HAGHQ16775 308 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 KHDC3LQ587J8 217 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 ZNF600Q6ZNG1 722 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 LINC00305Q7Z4B0 112 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 RNF125Q96EQ8 232 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 ATP6V0BQ99437 205 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 SERTAD4Q9NUC0 356 aa9.37□□□□□ -0.91
PTPRR-209ENST00000549308 CELSR1Q9NYQ6 3014 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 NOTCH2Q04721 2471 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 WI2-2373I1.2A0A1W2PRP0 233 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 S100A1P23297 94 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 ADMP35318 185 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 ARL3P36405 182 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 RPL15P61313 204 aaKnown RBP9.36□□□□□ -0.91
PTPRR-209ENST00000549308 SRSF3P84103 164 aaKnown RBP9.36□□□□□ -0.91
PTPRR-209ENST00000549308 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
PTPRR-209ENST00000549308 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 PUS1Q9Y606 427 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTPRR-209ENST00000549308 TLN2Q9Y4G6 2542 aa9.36□□□□□ -0.91
PTPRR-209ENST00000549308 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.35□□□□□ -0.91
PTPRR-209ENST00000549308 TRAV5A0A0B4J249 113 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 IGHV3-35A0A0C4DH35 117 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 PPP5D1E7EU14 171 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 OR7C2O60412 319 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 OR2C1O95371 312 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 GCHFRP30047 84 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 PSMB3P49720 205 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 PPT1P50897 306 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 RELQ04864 619 aaPredicted RBP9.35□□□□□ -0.91
PTPRR-209ENST00000549308 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 ZNF491Q8N8L2 437 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 OR5AU1Q8NGC0 362 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 OR4X2Q8NGF9 303 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 SLC25A2Q9BXI2 301 aa9.35□□□□□ -0.91
PTPRR-209ENST00000549308 MRPL27Q9P0M9 148 aaKnown RBP9.35□□□□□ -0.91
PTPRR-209ENST00000549308 LOC102723971A0A1B0GUV8 181 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 ANKRD34BA5PLL1 514 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 RPLP1P05386 114 aaKnown RBP9.34□□□□□ -0.91
PTPRR-209ENST00000549308 USF2Q15853 346 aaPredicted RBP9.34□□□□□ -0.91
PTPRR-209ENST00000549308 ZNF506Q5JVG8 444 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 ZNF343Q6P1L6 599 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 RXFP4Q8TDU9 374 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 OR5B12Q96R08 314 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 RARRES2Q99969 163 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 MANBALQ9NQG1 85 aa9.34□□□□□ -0.91
PTPRR-209ENST00000549308 SONP18583 2426 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms