RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 VN1R17PQ8TDU5 208 aa13.46□□□□□ -0.25
HDAC7-227ENST00000548080 DUX3Q96PT4 197 aa13.46□□□□□ -0.25
HDAC7-227ENST00000548080 OR5B12Q96R08 314 aa13.46□□□□□ -0.25
HDAC7-227ENST00000548080 SLC39A9Q9NUM3 307 aa13.46□□□□□ -0.25
HDAC7-227ENST00000548080 MFSD2BA6NFX1 497 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 H3BUA1 57 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 CLN5O75503 358 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 YIF1AO95070 293 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 BRI3O95415 125 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 IGLV1-40P01703 118 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 ELANEP08246 267 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 M6PRP20645 277 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 SELENOTP62341 195 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 DEFB136Q30KP8 78 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 COMMD1Q8N668 190 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 MED9Q9NWA0 146 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 C21orf62Q9NYP8 219 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 PFDN2Q9UHV9 154 aa13.45□□□□□ -0.26
HDAC7-227ENST00000548080 H2AFB1P0C5Y9 115 aa13.44□□□□□ -0.26
HDAC7-227ENST00000548080 RPP25LQ8N5L8 163 aaKnown RBP13.44□□□□□ -0.26
HDAC7-227ENST00000548080 TXN2Q99757 166 aa13.44□□□□□ -0.26
HDAC7-227ENST00000548080 HRH4Q9H3N8 390 aa13.44□□□□□ -0.26
HDAC7-227ENST00000548080 TRAV30A0A087WSZ9 112 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 IGLC1P0CG04 106 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 GATA2P23769 480 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-227ENST00000548080 FCGR2BP31994 310 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-227ENST00000548080 ZNF90Q03938 601 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 C15orf32Q32M92 178 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 RNF152Q8N8N0 203 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 LYPD6BQ8NI32 183 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 ACTR3CQ9C0K3 210 aaPredicted RBP13.43□□□□□ -0.26
HDAC7-227ENST00000548080 GNB4Q9HAV0 340 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 S4R3C0 116 aa13.43□□□□□ -0.26
HDAC7-227ENST00000548080 FAM223BA6NKX1 122 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 GNG7O60262 68 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 TRGV3P03979 118 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 RAB9AP51151 201 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 ATP5G2Q06055 141 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 KIAA0141Q14154 515 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-227ENST00000548080 Q56UQ5 140 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 GCSAMLQ5JQS6 135 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 FAM122CQ6P4D5 195 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 COMMD7Q86VX2 200 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 FAM223AQ8IWN6 122 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 MBD3L1Q8WWY6 194 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 RCC1LQ96I51 464 aaKnown RBP13.42□□□□□ -0.26
HDAC7-227ENST00000548080 IGHV3-11P01762 117 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 FABP1P07148 127 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 TPPP2P59282 170 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 ZNF726P1Q15940 193 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 TIGITQ495A1 244 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 ZNF491Q8N8L2 437 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 OR4F17Q8NGA8 305 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 ZNF502Q8TBZ5 544 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 SFT2D1Q8WV19 159 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 OR4F4Q96R69 305 aa13.42□□□□□ -0.26
HDAC7-227ENST00000548080 TRAV1-1A0A0B4J248 108 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 CTXND1A0A1B0GTU2 59 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 SEC14L6B5MCN3 397 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 F8W735 103 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-227ENST00000548080 TEX46H3BTG2 121 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 IGKV1-17P01599 117 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 HBE1P02100 147 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 PF4P02776 101 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 MYOZ3Q8TDC0 251 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 MARC2Q969Z3 335 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
HDAC7-227ENST00000548080 TRBV7-1A0A0A6YYK4 115 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 A0A1W2PPV4 95 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 SCGB2A1O75556 95 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 CDC34P49427 236 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-227ENST00000548080 SPSB3Q6PJ21 355 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 LCN15Q6UWW0 184 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 IL34Q6ZMJ4 242 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 SSX7Q7RTT5 188 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 RAB24Q969Q5 203 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 RAX2Q96IS3 184 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 USMG5Q96IX5 58 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 SLC25A22Q9H936 323 aa13.4□□□□□ -0.26
HDAC7-227ENST00000548080 GAR1Q9NY12 217 aaKnown RBP13.4□□□□□ -0.26
HDAC7-227ENST00000548080 MAP1LC3B2A6NCE7 125 aa13.39□□□□□ -0.27
HDAC7-227ENST00000548080 RD3LP0DJH9 198 aa13.39□□□□□ -0.27
HDAC7-227ENST00000548080 CDX1P47902 265 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-227ENST00000548080 YPEL3P61236 119 aaPredicted RBP13.39□□□□□ -0.27
HDAC7-227ENST00000548080 RHOBP62745 196 aa13.39□□□□□ -0.27
HDAC7-227ENST00000548080 ATP6V0BQ99437 205 aa13.39□□□□□ -0.27
HDAC7-227ENST00000548080 MAP1LC3BQ9GZQ8 125 aa13.39□□□□□ -0.27
HDAC7-227ENST00000548080 FBN3Q75N90 2809 aa13.39□□□□□ -0.27
HDAC7-227ENST00000548080 A0A1B0GV50 99 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 OR2T8A6NH00 312 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 TOMM40O96008 361 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 PSG1P11464 419 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 OR1L4Q8NGR5 311 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 GATAD1Q8WUU5 269 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 C4orf3Q8WVX3 66 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 DNAJC4Q9NNZ3 241 aa13.38□□□□□ -0.27
HDAC7-227ENST00000548080 A0A0G2JLM5 398 aa13.37□□□□□ -0.27
HDAC7-227ENST00000548080 RAB19A4D1S5 217 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms