RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 COPZ2Q9P299 210 aa4.62□□□□□ -1.67
LDHC-209ENST00000545848 BIRC6Q9NR09 4857 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 IGHV7-4-1A0A0J9YVY3 117 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 DISC1C4P0D8 188 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 H3BP45 60 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 SNAPC5O75971 98 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 IGLC1P0CG04 106 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 HIST1H1BP16401 226 aaKnown RBP4.61□□□□□ -1.67
LDHC-209ENST00000545848 TFPI2P48307 235 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 HOXA1P49639 335 aaPredicted RBP4.61□□□□□ -1.67
LDHC-209ENST00000545848 PAX9P55771 341 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 MRPS10P82664 201 aaKnown RBP4.61□□□□□ -1.67
LDHC-209ENST00000545848 SURF2Q15527 256 aaPredicted RBP4.61□□□□□ -1.67
LDHC-209ENST00000545848 CNPY1Q3B7I2 92 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 ZNF57Q68EA5 555 aaPredicted RBP4.61□□□□□ -1.67
LDHC-209ENST00000545848 DYNLRB2Q8TF09 96 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 BSCL2Q96G97 398 aaPredicted RBP4.61□□□□□ -1.67
LDHC-209ENST00000545848 SEC22CQ9BRL7 303 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 GPR61Q9BZJ8 451 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 HSPB7Q9UBY9 170 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 SMPXQ9UHP9 88 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 PUS1Q9Y606 427 aaKnown RBP eCLIP4.61□□□□□ -1.67
LDHC-209ENST00000545848 FAT2Q9NYQ8 4349 aa4.61□□□□□ -1.67
LDHC-209ENST00000545848 A4D1N5 150 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 PMS2P5A8MQ11 134 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 OR11H12B2RN74 326 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 ZNF701M0R085 212 aaPredicted RBP4.6□□□□□ -1.67
LDHC-209ENST00000545848 NDUFA4O00483 81 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 DFFBO76075 338 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 TNFRSF6BO95407 300 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 SFT2D2O95562 160 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 IFNA17P01571 189 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 HOXB5P09067 269 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 RPL35AP18077 110 aaKnown RBP4.6□□□□□ -1.67
LDHC-209ENST00000545848 C4BPBP20851 252 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 GATA2P23769 480 aaPredicted RBP4.6□□□□□ -1.67
LDHC-209ENST00000545848 CD40LGP29965 261 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 RND2P52198 227 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 ZNF90Q03938 601 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 ARL16Q0P5N6 197 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 CASC10Q5T4H9 136 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 GGNBP1Q5YKI7 109 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 LCN12Q6JVE5 192 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 LPCAT3Q6P1A2 487 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 SPSB3Q6PJ21 355 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 TOMM5Q8N4H5 51 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 CCDC71LQ8N9Z2 235 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 ZFAND1Q8TCF1 268 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 CXorf58Q96LI9 332 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 PRRT1Q99946 306 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 OVOL2Q9BRP0 275 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 RHPN1-AS1Q9BWJ2 59 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 C11orf1Q9H5F2 150 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 VSIRQ9H7M9 311 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 MAP6D1Q9H9H5 199 aa4.6□□□□□ -1.67
LDHC-209ENST00000545848 C14orf166Q9Y224 244 aaKnown RBP4.6□□□□□ -1.67
LDHC-209ENST00000545848 RCL1Q9Y2P8 373 aaKnown RBP4.6□□□□□ -1.67
LDHC-209ENST00000545848 TRAV34A0A0B4J273 112 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 A0A0B4J2A0 478 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 C9orf170A2RU37 121 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 KNCNA6PVL3 124 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 CLN5O75503 358 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 NDUFB6O95139 128 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 CAMLGP49069 296 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 SPCS3P61009 180 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 DHRS2Q13268 280 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 DEFB135Q30KP9 77 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 C2orf83Q53S99 150 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 GDF5OSQ5U4N7 250 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 LEMD1Q68G75 181 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 ETFRF1Q6IPR1 90 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 SLC16A13Q7RTY0 426 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 SLC24A4Q8NFF2 622 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 OR4D5Q8NGN0 318 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 NPIPB3Q92617 1050 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 TSC22D3Q99576 134 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 SCRT1Q9BWW7 348 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 DAZ1Q9NQZ3 744 aaKnown RBP4.59□□□□□ -1.67
LDHC-209ENST00000545848 PEMTQ9UBM1 199 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 SHPKQ9UHJ6 478 aa4.59□□□□□ -1.67
LDHC-209ENST00000545848 DNAH17Q9UFH2 4485 aa4.59□□□□□ -1.68
LDHC-209ENST00000545848 TRAV6A0A075B6T7 132 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 CEBPZOSA8MTT3 80 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 F5H697 171 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 TSPAN4O14817 238 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 SULT1A3P0DMM9 295 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 SULT1A4P0DMN0 295 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 NPY1RP25929 384 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 OPRK1P41145 380 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 MFAP4P55083 255 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 POLR2GP62487 172 aaKnown RBP eCLIP4.58□□□□□ -1.68
LDHC-209ENST00000545848 GAMTQ14353 236 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 SMCO1Q147U7 214 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 FAM106AQ4KMX7 169 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 MORN5Q5VZ52 161 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 THOC7Q6I9Y2 204 aaKnown RBP4.58□□□□□ -1.68
LDHC-209ENST00000545848 TCF24Q7RTU0 167 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 HSD17B13Q7Z5P4 300 aaPredicted RBP4.58□□□□□ -1.68
LDHC-209ENST00000545848 SGPP2Q8IWX5 399 aa4.58□□□□□ -1.68
LDHC-209ENST00000545848 LRTM2Q8N967 370 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms