RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 PMS2P5A8MQ11 134 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 CFHR3Q02985 330 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 INTS1Q8N201 2190 aaKnown RBP16.6■□□□□ 0.25
BPTF-208ENST00000544778 AKAP6Q13023 2319 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 A0A1W2PR77 199 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 EREGO14944 169 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 LAMTOR2Q9Y2Q5 125 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 ESDP10768 282 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 PPBPP02775 128 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 C1QL4Q86Z23 238 aa16.6■□□□□ 0.25
BPTF-208ENST00000544778 A8MXK9 166 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 LINC00518Q8N0U6 118 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 H3BUX3 64 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 TRAV8-1A0A0A6YYK1 113 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 IGHV2-26A0A0B4J1V2 119 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 C18orf12Q96KH6 178 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 KMT2EQ8IZD2 1858 aa16.59■□□□□ 0.25
BPTF-208ENST00000544778 DMRTC2Q8IXT2 367 aaPredicted RBP16.59■□□□□ 0.25
BPTF-208ENST00000544778 CACNA1DQ01668 2161 aa16.58■□□□□ 0.25
BPTF-208ENST00000544778 ZNF883P0CG24 379 aa16.58■□□□□ 0.25
BPTF-208ENST00000544778 PRCDQ00LT1 54 aa16.58■□□□□ 0.25
BPTF-208ENST00000544778 ZNF479Q96JC4 524 aa16.58■□□□□ 0.25
BPTF-208ENST00000544778 SNHG12Q9BXW3 62 aa16.58■□□□□ 0.25
BPTF-208ENST00000544778 ERVH48-1M5A8F1 160 aa16.58■□□□□ 0.24
BPTF-208ENST00000544778 ZNF672Q499Z4 452 aaPredicted RBP16.58■□□□□ 0.24
BPTF-208ENST00000544778 ZFAND6Q6FIF0 208 aa16.58■□□□□ 0.24
BPTF-208ENST00000544778 TRAV8-3A0A0A6YYJ7 113 aa16.58■□□□□ 0.24
BPTF-208ENST00000544778 E9PLN8 166 aa16.58■□□□□ 0.24
BPTF-208ENST00000544778 ZNF329Q86UD4 541 aa16.58■□□□□ 0.24
BPTF-208ENST00000544778 ZNF561-AS1K7EIQ3 104 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 C2orf82Q6UX34 121 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 GGTLC1Q9BX51 225 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 EFNB3Q15768 340 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 TCRAP04437 139 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 SLC25A39Q9BZJ4 359 aaPredicted RBP16.57■□□□□ 0.24
BPTF-208ENST00000544778 COX11Q9Y6N1 276 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 SCRT1Q9BWW7 348 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 SCN4AP35499 1836 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 TAF1LQ8IZX4 1826 aa16.57■□□□□ 0.24
BPTF-208ENST00000544778 WISP3O95389 354 aaPredicted RBP16.56■□□□□ 0.24
BPTF-208ENST00000544778 TMEM105Q8N8V8 129 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 D6R8Y8 96 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 IGHV1-46P01743 117 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 CHCHD1Q96BP2 118 aaKnown RBP16.56■□□□□ 0.24
BPTF-208ENST00000544778 TRBV7-1A0A0A6YYK4 115 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 GAGE2AQ6NT46 116 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 F5H768 121 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 RNF114Q9Y508 228 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.56■□□□□ 0.24
BPTF-208ENST00000544778 TBX6O95947 436 aaPredicted RBP16.56■□□□□ 0.24
BPTF-208ENST00000544778 CSTL1Q9H114 145 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 TMEM200BQ69YZ2 307 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 SPSB3Q6PJ21 355 aa16.56■□□□□ 0.24
BPTF-208ENST00000544778 DLX4Q92988 240 aaPredicted RBP16.56■□□□□ 0.24
BPTF-208ENST00000544778 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
BPTF-208ENST00000544778 CD200R1LQ6Q8B3 271 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 IGKV1D-13A0A0B4J2D9 117 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 CLPSP04118 112 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 IGKV1-13P0DP09 117 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 DNAJC30Q96LL9 226 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 TEX38Q6PEX7 206 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 GATA4P43694 442 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 ANXA2RQ3ZCQ2 193 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 PLEKHB2Q96CS7 222 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 IFI6P09912 130 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 RNF166Q96A37 237 aaPredicted RBP16.55■□□□□ 0.24
BPTF-208ENST00000544778 C1QTNF4Q9BXJ3 329 aa16.55■□□□□ 0.24
BPTF-208ENST00000544778 IGLV3-21P80748 117 aaPredicted RBP16.55■□□□□ 0.24
BPTF-208ENST00000544778 CACNA1IQ9P0X4 2223 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 GREB1Q4ZG55 1949 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 OCC1Q8TAD7 63 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 TRAV9-2A0A087WT02 112 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 NKAPP1Q8N9T2 125 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 XIRP1Q702N8 1843 aaKnown RBP16.54■□□□□ 0.24
BPTF-208ENST00000544778 A0A087WWC5 75 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 GAGE2BQ13066 116 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 WBP1Q96G27 269 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 MYO7BQ6PIF6 2116 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 A0A087WWL8 130 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 TRBV6-7A0A0A0MS04 114 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 F8VVB4 439 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 F8VWA3 439 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 FOXF2Q12947 444 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 KIAA2026Q5HYC2 2103 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 EFNA4P52798 201 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 SPXQ9BT56 116 aa16.54■□□□□ 0.24
BPTF-208ENST00000544778 MRPS18CQ9Y3D5 142 aaKnown RBP16.54■□□□□ 0.24
BPTF-208ENST00000544778 B4DSR2 109 aa16.53■□□□□ 0.24
BPTF-208ENST00000544778 Q71RC1 249 aaPredicted RBP16.53■□□□□ 0.24
BPTF-208ENST00000544778 HAPLN4Q86UW8 402 aa16.53■□□□□ 0.24
BPTF-208ENST00000544778 GNB1LQ9BYB4 327 aa16.53■□□□□ 0.24
BPTF-208ENST00000544778 NAA38Q9BRA0 125 aaKnown RBP16.53■□□□□ 0.24
BPTF-208ENST00000544778 THAP8Q8NA92 274 aa16.53■□□□□ 0.24
BPTF-208ENST00000544778 OSTCQ9NRP0 149 aa16.52■□□□□ 0.24
BPTF-208ENST00000544778 TGFBR3LH3BV60 316 aa16.52■□□□□ 0.24
BPTF-208ENST00000544778 SSBP2P81877 361 aaPredicted RBP16.52■□□□□ 0.23
BPTF-208ENST00000544778 IGFL4Q6B9Z1 124 aa16.52■□□□□ 0.23
BPTF-208ENST00000544778 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.23
BPTF-208ENST00000544778 LOC285556D6RIA3 1793 aa16.52■□□□□ 0.23
BPTF-208ENST00000544778 TPTE2P1Q5T6R2 138 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms