RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 DUSP18Q8NEJ0 188 aa9.21□□□□□ -0.94
USP28-212ENST00000544750 ZFAND3Q9H8U3 227 aa9.21□□□□□ -0.94
USP28-212ENST00000544750 SHPKQ9UHJ6 478 aa9.21□□□□□ -0.94
USP28-212ENST00000544750 LINC00854A0A1B0GVQ3 168 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 NAP1L6A6NFF2 107 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 K7EQG2 157 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 PLA2G10O15496 165 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 NXPH3O95157 252 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 SFT2D2O95562 160 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 SULT1A3P0DMM9 295 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 SULT1A4P0DMN0 295 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 SRPXP78539 464 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 ZNF767PQ75MW2 155 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 LGI3Q8N145 548 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 CENPSQ8N2Z9 138 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 LRTM2Q8N967 370 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 TMEM170AQ8WVE7 144 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 NDUFAF3Q9BU61 184 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 PDCD10Q9BUL8 212 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 FNDC4Q9H6D8 234 aaPredicted RBP9.2□□□□□ -0.94
USP28-212ENST00000544750 MRPL36Q9P0J6 103 aaKnown RBP9.2□□□□□ -0.94
USP28-212ENST00000544750 TBC1D24Q9ULP9 559 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 FLVCR2Q9UPI3 526 aa9.2□□□□□ -0.94
USP28-212ENST00000544750 DNASE2O00115 360 aaPredicted RBP9.19□□□□□ -0.94
USP28-212ENST00000544750 PITX3O75364 302 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 ANXA3P12429 323 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 VAMP1P23763 118 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 INPP1P49441 399 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 SMCO1Q147U7 214 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 LINC00299Q6ZSB3 139 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 PINX1Q96BK5 328 aaKnown RBP9.19□□□□□ -0.94
USP28-212ENST00000544750 GRAMD2BQ96HH9 432 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 C7orf50Q9BRJ6 194 aaKnown RBP9.19□□□□□ -0.94
USP28-212ENST00000544750 GINS3Q9BRX5 216 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 HSPB7Q9UBY9 170 aa9.19□□□□□ -0.94
USP28-212ENST00000544750 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 DUXBA0A1W2PPF3 345 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 SNCAP37840 140 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 UBE2MP61081 183 aaKnown RBP9.18□□□□□ -0.94
USP28-212ENST00000544750 MLANAQ16655 118 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 DCANP1Q8TF63 244 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 ENY2Q9NPA8 101 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 CLEC5AQ9NY25 188 aa9.18□□□□□ -0.94
USP28-212ENST00000544750 IGLV2-18A0A075B6J9 118 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 A0A1B0GU03 582 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 C9orf170A2RU37 121 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 KNCNA6PVL3 124 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 CORTO00230 105 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 LYRM1O43325 122 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 GNG7O60262 68 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 HTR2BP41595 481 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 C2orf83Q53S99 150 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 ZNF600Q6ZNG1 722 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 CCDC32Q9BV29 185 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 RBKSQ9H477 322 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 RABAC1Q9UI14 185 aa9.17□□□□□ -0.94
USP28-212ENST00000544750 PUS1Q9Y606 427 aaKnown RBP eCLIP9.17□□□□□ -0.94
USP28-212ENST00000544750 CEBPZOSA8MTT3 80 aa9.16□□□□□ -0.94
USP28-212ENST00000544750 SLC25A6P12236 298 aa9.16□□□□□ -0.94
USP28-212ENST00000544750 ANXA7P20073 488 aaKnown RBP9.16□□□□□ -0.94
USP28-212ENST00000544750 SUB1P53999 127 aaKnown RBP eCLIP9.16□□□□□ -0.94
USP28-212ENST00000544750 DHRS2Q13268 280 aa9.16□□□□□ -0.94
USP28-212ENST00000544750 SLC24A4Q8NFF2 622 aa9.16□□□□□ -0.94
USP28-212ENST00000544750 HEYLQ9NQ87 328 aaPredicted RBP9.16□□□□□ -0.94
USP28-212ENST00000544750 PTTG2Q9NZH5 202 aa9.16□□□□□ -0.94
USP28-212ENST00000544750 CENPXA8MT69 81 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 TMEM50AO95807 157 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 IFNA10P01566 189 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 OR4E1P0C645 316 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 ZNF688P0C7X2 276 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 OPRK1P41145 380 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 RPL11P62913 178 aaKnown RBP9.15□□□□□ -0.94
USP28-212ENST00000544750 GGNBP1Q5YKI7 109 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 MAPKAPK5-AS1Q8N8E1 139 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 OR1S1Q8NH92 325 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 DTD1Q8TEA8 209 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 S100ZQ8WXG8 99 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 C20orf85Q9H1P6 137 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 CACFD1Q9UGQ2 172 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 TMED3Q9Y3Q3 217 aa9.15□□□□□ -0.94
USP28-212ENST00000544750 PIGBOS1A0A0B4J2F0 54 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 CLN5O75503 358 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 ADAP1O75689 374 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 HOXB5P09067 269 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 NPY1RP25929 384 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 CRYBB3P26998 211 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 NPBWR1P48145 328 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 RNF212Q495C1 297 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 ACTL10Q5JWF8 245 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 STXBP6Q8NFX7 210 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 OR4X1Q8NH49 305 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 FAM210BQ96KR6 192 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 TMEM231Q9H6L2 316 aa9.14□□□□□ -0.95
USP28-212ENST00000544750 A0A1W2PS18 150 aa9.13□□□□□ -0.95
USP28-212ENST00000544750 IFNA21P01568 189 aa9.13□□□□□ -0.95
USP28-212ENST00000544750 IGKV1-17P01599 117 aa9.13□□□□□ -0.95
USP28-212ENST00000544750 TCRBP04435 133 aa9.13□□□□□ -0.95
USP28-212ENST00000544750 NPPCP23582 126 aa9.13□□□□□ -0.95
USP28-212ENST00000544750 P2RY1P47900 373 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms