RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 K7EP13 123 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 SIVA1O15304 175 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 RS1O15537 224 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 ADAP1O75689 374 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 MT-CO2P00403 227 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 PRB4P10163 310 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-220ENST00000544550 M6PRP20645 277 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 GADD45AP24522 165 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 TSPOP30536 169 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 ETV1P50549 477 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 TMEM50BP56557 158 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 ERVK-16P61578 105 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 PSG9Q00887 426 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 PNRC1Q12796 327 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-220ENST00000544550 EIF4EBP1Q13541 118 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-220ENST00000544550 ARL6IP1Q15041 203 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 PET117Q6UWS5 81 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 FOXI2Q6ZQN5 318 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 TPRA1Q86W33 373 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 OR13F1Q8NGS4 319 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 RXFP4Q8TDU9 374 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 RAB3CQ96E17 227 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 HINT2Q9BX68 163 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 FAM107BQ9H098 131 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 AMBNQ9NP70 447 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 NRN1Q9NPD7 142 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 FKBP11Q9NYL4 201 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 TAS2R8Q9NYW2 309 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 COMMD9Q9P000 198 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 ARL2BPQ9Y2Y0 163 aa2.78□□□□□ -1.96
SNHG1-220ENST00000544550 SRRM2Q9UQ35 2752 aaKnown RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 A0A0B4J293 547 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 TEX13DA0A0J9YY54 714 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 J3QRK9 145 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 GSTZ1O43708 216 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 SNAPC5O75971 98 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 DNAH10OSP0CZ25 163 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 CD37P11049 281 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 NFYAP23511 347 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 DTYMKP23919 212 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 ID1P41134 155 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 FXYD7P58549 80 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 RAB11BQ15907 218 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 ESRGQ1W209 222 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 DNAL1Q4LDG9 190 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 EBLN2Q6P2I7 272 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 C1orf158Q8N1D5 194 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 ZNF709Q8N972 641 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 OR4B1Q8NGF8 309 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 RHOXF1Q8NHV9 184 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 NUDCD2Q8WVJ2 157 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 FCGR1BQ92637 280 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM230Q96A57 120 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 PINX1Q96BK5 328 aaKnown RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 CENPNQ96H22 339 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 UHRF2Q96PU4 802 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 TSC22D3Q99576 134 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 SAV1Q9H4B6 383 aaPredicted RBP2.77□□□□□ -1.97
SNHG1-220ENST00000544550 PLGRKTQ9HBL7 147 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 PRNDQ9UKY0 176 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 AP4S1Q9Y587 144 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 OR51B2Q9Y5P1 312 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 NACAE9PAV3 2078 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 AGRNO00468 2067 aa2.77□□□□□ -1.97
SNHG1-220ENST00000544550 TRAV30A0A087WSZ9 112 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 TRAV26-1A0A087WT03 109 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 IGKV1D-13A0A0B4J2D9 117 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 A0A1B0GU03 582 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 PNMA8CA0A1B0GUJ8 204 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 CORTO00230 105 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 SLC17A2O00624 439 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 TNFSF12O43508 249 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 DENRO43583 198 aaKnown RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 TMEM50AO95807 157 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 LALBAP00709 142 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 INSP01308 110 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 IGKV3-20P01619 116 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 IGKV1-13P0DP09 117 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 NUP62P37198 522 aaPredicted RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 ASIPP42127 132 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 PSMB3P49720 205 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 RPL24P83731 157 aaKnown RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 ERHP84090 104 aaKnown RBP2.76□□□□□ -1.97
SNHG1-220ENST00000544550 OR5I1Q13606 314 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 VWC2Q2TAL6 325 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 HSD17B12Q53GQ0 312 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 SAMD13Q5VXD3 122 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 SFXN4Q6P4A7 337 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 CNIH2Q6PI25 160 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 SIGLEC15Q6ZMC9 328 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 MS4A15Q8N5U1 240 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 ZFP41Q8N8Y5 198 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 OR10R2Q8NGX6 335 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 COQ8AQ8NI60 647 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 MAFIPQ8WZ33 124 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 BORCS5Q969J3 196 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 C16orf74Q96GX8 76 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 IGF2BP2-AS1Q96M15 143 aa2.76□□□□□ -1.97
SNHG1-220ENST00000544550 SLC35B3Q9H1N7 401 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms