RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 EPDR1Q9UM22 224 aa14.33□□□□□ -0.12
VIM-209ENST00000544301 HILPDAQ9Y5L2 63 aa14.33□□□□□ -0.12
VIM-209ENST00000544301 LOC105371242A0A075B767 164 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 M0R1W7 72 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 CNIH1O95406 144 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 IGLC1P0CG04 106 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 GP9P14770 177 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 SLC35B1P78383 322 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 KLRD1Q13241 179 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 WDR73Q6P4I2 378 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 CFHR4Q92496 578 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 SSBP3Q9BWW4 388 aaPredicted RBP14.32□□□□□ -0.12
VIM-209ENST00000544301 PGPA6NDG6 321 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 TSTD3H0UI37 97 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 SLC25A5P05141 298 aaKnown RBP14.32□□□□□ -0.12
VIM-209ENST00000544301 LINC00310P59036 64 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 ASPHD1Q5U4P2 390 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 TMEM136Q6ZRR5 245 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 FAM231DQ6ZW35 169 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 CMTM2Q8TAZ6 248 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 FAM168AQ92567 244 aa14.32□□□□□ -0.12
VIM-209ENST00000544301 CA1P00915 261 aaPredicted RBP14.31□□□□□ -0.12
VIM-209ENST00000544301 MT-ND6P03923 174 aa14.31□□□□□ -0.12
VIM-209ENST00000544301 PSG1P11464 419 aa14.31□□□□□ -0.12
VIM-209ENST00000544301 TMEM183BQ1AE95 376 aa14.31□□□□□ -0.12
VIM-209ENST00000544301 LEMD1Q68G75 181 aa14.31□□□□□ -0.12
VIM-209ENST00000544301 IGFBPL1Q8WX77 278 aa14.31□□□□□ -0.12
VIM-209ENST00000544301 ARHGAP32A7KAX9 2087 aa14.31□□□□□ -0.12
VIM-209ENST00000544301 ODF3BA8MYP8 253 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 NBR2O15453 112 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 CEACAM3P40198 252 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 DEFA6Q01524 100 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 COX19Q49B96 90 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 MBD6Q96DN6 1003 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 NAT8BQ9UHF3 227 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 HIGD1AQ9Y241 93 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 ESDP10768 282 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 PRTN3P24158 256 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 NPBQ8NG41 125 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 KLF12Q9Y4X4 402 aa14.3□□□□□ -0.12
VIM-209ENST00000544301 IZUMO1RA6ND01 250 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 GATCO43716 136 aaKnown RBP14.29□□□□□ -0.12
VIM-209ENST00000544301 AMY1AP04745 511 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 PAX1P15863 534 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 CD24P25063 80 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 DDTP30046 118 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 LYZP61626 148 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 UBE2G1P62253 170 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 Q0VG73 95 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 MRPL54Q6P161 138 aaKnown RBP14.29□□□□□ -0.12
VIM-209ENST00000544301 ZNF664Q8N3J9 261 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 NUDT10Q8NFP7 164 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 NUDT11Q96G61 164 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 K7EIM0 57 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 SERF1AO75920 110 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 NDUFA3O95167 84 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 DTX2Q86UW9 622 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 MS4A10Q96PG2 267 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 RASL11BQ9BPW5 248 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 C7orf69Q9H7B7 122 aa14.29□□□□□ -0.12
VIM-209ENST00000544301 A0A1W2PRD5 423 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 A0A1W2PRF3 423 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 A0A1W2PRM7 423 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 F2Z2F3 143 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 H3BTX0 84 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 IGKV1-17P01599 117 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 RAB4BP61018 213 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 IQCJQ1A5X6 159 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 FBLN7Q53RD9 439 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 ZNF600Q6ZNG1 722 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 GRAMD2BQ96HH9 432 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 SPTBN4Q9H254 2564 aa14.28□□□□□ -0.12
VIM-209ENST00000544301 PRR27Q6MZM9 219 aa14.27□□□□□ -0.12
VIM-209ENST00000544301 BAGE3Q86Y29 109 aa14.27□□□□□ -0.12
VIM-209ENST00000544301 SGK494Q96LW2 274 aa14.27□□□□□ -0.12
VIM-209ENST00000544301 ATG101Q9BSB4 218 aa14.27□□□□□ -0.12
VIM-209ENST00000544301 SLC25A39Q9BZJ4 359 aaPredicted RBP14.27□□□□□ -0.12
VIM-209ENST00000544301 Q9H3A6 140 aa14.27□□□□□ -0.12
VIM-209ENST00000544301 RPH3ALQ9UNE2 315 aa14.27□□□□□ -0.12
VIM-209ENST00000544301 TPPP2P59282 170 aa14.27□□□□□ -0.13
VIM-209ENST00000544301 PAFAH1B2P68402 229 aa14.27□□□□□ -0.13
VIM-209ENST00000544301 UNQ6494/PRO21346Q6UXR6 183 aa14.27□□□□□ -0.13
VIM-209ENST00000544301 C5orf17Q8NAS9 161 aa14.27□□□□□ -0.13
VIM-209ENST00000544301 C14orf144Q96I85 54 aa14.27□□□□□ -0.13
VIM-209ENST00000544301 ABCA1O95477 2261 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 KIAA1644Q3SXP7 199 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 SMIM12Q96EX1 92 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 FAM103A1Q9BTL3 118 aaKnown RBP14.26□□□□□ -0.13
VIM-209ENST00000544301 GNB4Q9HAV0 340 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 MRPL27Q9P0M9 148 aaKnown RBP14.26□□□□□ -0.13
VIM-209ENST00000544301 TMEM14CQ9P0S9 112 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 A0A1W2PPR1 153 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 SCGB1D1O95968 90 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 HLA-DQA1P01909 254 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 HES1Q14469 280 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 C5orf64Q2M2E5 130 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 GPR82Q96P67 336 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 MLST8Q9BVC4 326 aa14.26□□□□□ -0.13
VIM-209ENST00000544301 GPR6P46095 362 aaPredicted RBP14.25□□□□□ -0.13
VIM-209ENST00000544301 USF2Q15853 346 aaPredicted RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms