RNA–Protein interactions for RNA: ENST00000543744.1

PTPN6-222, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best)

Gene PTPN6, Length 2,043 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-222ENST00000543744 PGPA6NDG6 321 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 NBR2O15453 112 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 NUPR1O60356 82 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 MT-ND6P03923 174 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 SLC25A5P05141 298 aaKnown RBP14.15□□□□□ -0.14
PTPN6-222ENST00000543744 IGLC1P0CG04 106 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 GNG5P63218 68 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 COX19Q49B96 90 aa14.15□□□□□ -0.14
PTPN6-222ENST00000543744 PSG1P11464 419 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 PRTN3P24158 256 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 UBE2G1P62253 170 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 SLC35B1P78383 322 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 KLRD1Q13241 179 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 TMEM183BQ1AE95 376 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 FAM209BQ5JX69 171 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 CMTM2Q8TAZ6 248 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 CFHR4Q92496 578 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 PRO1933Q9H354 126 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 NAT8BQ9UHF3 227 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 HIGD1AQ9Y241 93 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 GP9P14770 177 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 LYZP61626 148 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 LEMD1Q68G75 181 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 FAM231DQ6ZW35 169 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 RASL11BQ9BPW5 248 aa14.14□□□□□ -0.15
PTPN6-222ENST00000543744 ODF3BA8MYP8 253 aa14.13□□□□□ -0.15
PTPN6-222ENST00000543744 CA1P00915 261 aaPredicted RBP14.13□□□□□ -0.15
PTPN6-222ENST00000543744 DEFA6Q01524 100 aa14.13□□□□□ -0.15
PTPN6-222ENST00000543744 TP53TG3Q9ULZ0 132 aa14.13□□□□□ -0.15
PTPN6-222ENST00000543744 GATCO43716 136 aaKnown RBP14.12□□□□□ -0.15
PTPN6-222ENST00000543744 RAB4BP61018 213 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 TMEM136Q6ZRR5 245 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 NPBQ8NG41 125 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 FAM168AQ92567 244 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 IZUMO1RA6ND01 250 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 AMY1AP04745 511 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 CD24P25063 80 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 HES1Q14469 280 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 IQCJQ1A5X6 159 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 MRPL54Q6P161 138 aaKnown RBP14.12□□□□□ -0.15
PTPN6-222ENST00000543744 DTX2Q86UW9 622 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 BAGE3Q86Y29 109 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 MS4A10Q96PG2 267 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 RPH3ALQ9UNE2 315 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 KLF12Q9Y4X4 402 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 DCHS2Q6V1P9 2916 aa14.12□□□□□ -0.15
PTPN6-222ENST00000543744 TACC2O95359 2948 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 A0A1W2PRD5 423 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 A0A1W2PRF3 423 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 A0A1W2PRM7 423 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 NDUFA3O95167 84 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 DDTP30046 118 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 GPR6P46095 362 aaPredicted RBP14.11□□□□□ -0.15
PTPN6-222ENST00000543744 Q0VG73 95 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 ASPHD1Q5U4P2 390 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 PRR27Q6MZM9 219 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 ZNF600Q6ZNG1 722 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 C5orf17Q8NAS9 161 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 NUDT10Q8NFP7 164 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 NUDT11Q96G61 164 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 ATG101Q9BSB4 218 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 ZZEF1O43149 2961 aa14.11□□□□□ -0.15
PTPN6-222ENST00000543744 SERF1AO75920 110 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 ESDP10768 282 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 PAFAH1B2P68402 229 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 IGFBPL1Q8WX77 278 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 SMIM12Q96EX1 92 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 GRAMD2BQ96HH9 432 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 CHRDL1Q9BU40 450 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 SLC25A39Q9BZJ4 359 aaPredicted RBP14.1□□□□□ -0.15
PTPN6-222ENST00000543744 Q9H3A6 140 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 H3BTX0 84 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 K7EIM0 57 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 IGKV1-17P01599 117 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 TPPP2P59282 170 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 C1orf122Q6ZSJ8 110 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 MBD6Q96DN6 1003 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 SGK494Q96LW2 274 aa14.1□□□□□ -0.15
PTPN6-222ENST00000543744 FAM103A1Q9BTL3 118 aaKnown RBP14.1□□□□□ -0.15
PTPN6-222ENST00000543744 HRNRQ86YZ3 2850 aaPredicted RBP14.09□□□□□ -0.15
PTPN6-222ENST00000543744 SPTBN4Q9H254 2564 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 SCGB1D1O95968 90 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 HLA-DQA1P01909 254 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 HIST1H1EP10412 219 aaKnown RBP14.09□□□□□ -0.15
PTPN6-222ENST00000543744 LINC00310P59036 64 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 USF2Q15853 346 aaPredicted RBP14.09□□□□□ -0.15
PTPN6-222ENST00000543744 C5orf64Q2M2E5 130 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 ZNF664Q8N3J9 261 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 GPR82Q96P67 336 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 ZNF331Q9NQX6 463 aaPredicted RBP14.09□□□□□ -0.15
PTPN6-222ENST00000543744 TMEM14CQ9P0S9 112 aa14.09□□□□□ -0.15
PTPN6-222ENST00000543744 LY6DQ14210 128 aa14.08□□□□□ -0.15
PTPN6-222ENST00000543744 CCDC144NLQ6NUI1 221 aa14.08□□□□□ -0.15
PTPN6-222ENST00000543744 VMO1Q7Z5L0 202 aa14.08□□□□□ -0.15
PTPN6-222ENST00000543744 FMC1Q96HJ9 113 aa14.08□□□□□ -0.15
PTPN6-222ENST00000543744 C7orf69Q9H7B7 122 aa14.08□□□□□ -0.15
PTPN6-222ENST00000543744 MRPL27Q9P0M9 148 aaKnown RBP14.08□□□□□ -0.15
PTPN6-222ENST00000543744 TOMM40O96008 361 aa14.08□□□□□ -0.16
PTPN6-222ENST00000543744 TCRAP04437 139 aa14.08□□□□□ -0.16
PTPN6-222ENST00000543744 CDKN1AP38936 164 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms