RNA–Protein interactions for RNA: ENST00000542777.1

DDX11-222, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 489 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-222	ENST00000542777		Q6ZTC4	211 aa		11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	SELENOH	Q8IZQ5	122 aa	Known RBP	11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	CSNK1G2-AS1	Q8NCQ2	148 aa		11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	LHFPL5	Q8TAF8	219 aa		11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	GLMP	Q8WWB7	406 aa		11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	RBPMS	Q93062	196 aa	Known RBP	11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	RAB40C	Q96S21	281 aa		11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	CCDC32	Q9BV29	185 aa		11.62	□□□□□ -0.55
DDX11-222	ENST00000542777	CEBPZOS	A8MTT3	80 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	OR10J1	P30954	320 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	INPP1	P49441	399 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	DHODH	Q02127	395 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	GPR146	Q96CH1	333 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	WDR12	Q9GZL7	423 aa	Known RBP	11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	NAA60	Q9H7X0	242 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	PRR13	Q9NZ81	148 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	CACNG5	Q9UF02	275 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	SCP2D1	Q9UJQ7	156 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	FLVCR2	Q9UPI3	526 aa		11.61	□□□□□ -0.55
DDX11-222	ENST00000542777	FAU	P35544	74 aa	Known RBP	11.6	□□□□□ -0.55
DDX11-222	ENST00000542777	TMEM268	Q5VZI3	342 aa		11.6	□□□□□ -0.55
DDX11-222	ENST00000542777	SLC24A4	Q8NFF2	622 aa		11.6	□□□□□ -0.55
DDX11-222	ENST00000542777	IGHV4-4	A0A075B6R2	117 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	LYRM1	O43325	122 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	UPK1B	O75841	260 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	IL4	P05112	153 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	SUPT4H1	P63272	117 aa	Known RBP	11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	SURF2	Q15527	256 aa	Predicted RBP	11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	USF2	Q15853	346 aa	Predicted RBP	11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	ETFRF1	Q6IPR1	90 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	TMEM170A	Q8WVE7	144 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	NPIPB3	Q92617	1050 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	HERC2	O95714	4834 aa		11.59	□□□□□ -0.55
DDX11-222	ENST00000542777	DNAH6	Q9C0G6	4158 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	CRYM-AS1	A6NIL9	109 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	FAM90A26	D6RGX4	464 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	NXPH3	O95157	252 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	NUTF2	P61970	127 aa	Known RBP	11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	SNRPD3	P62318	126 aa	Known RBP	11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	NOXA1	Q86UR1	476 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	DEDD2	Q8WXF8	326 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	ACY3	Q96HD9	319 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	RNF126	Q9BV68	326 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	C1QTNF4	Q9BXJ3	329 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	NRN1	Q9NPD7	142 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	CELA1	Q9UNI1	258 aa		11.58	□□□□□ -0.56
DDX11-222	ENST00000542777	NAP1L6	A6NFF2	107 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	BUB3	O43684	328 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	NDUFB6	O95139	128 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	TOMM40	O96008	361 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	RD3L	P0DJH9	198 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	NPY1R	P25929	384 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	C12orf74	Q32Q52	190 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	SIGLEC15	Q6ZMC9	328 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	TMED4	Q7Z7H5	227 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	C7orf50	Q9BRJ6	194 aa	Known RBP	11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	SEPSECS	Q9HD40	501 aa	Known RBP	11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	XCL2	Q9UBD3	114 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	TMEM56-RWDD3	S4R434	201 aa		11.57	□□□□□ -0.56
DDX11-222	ENST00000542777	DEFB131B	A0A096LNP1	70 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777		H3BMM0	161 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	IFNA10	P01566	189 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	SULT1A3	P0DMM9	295 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	SULT1A4	P0DMN0	295 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	AKR1C4	P17516	323 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	ASAH1	Q13510	395 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	ZNF767P	Q75MW2	155 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	CACFD1	Q9UGQ2	172 aa		11.56	□□□□□ -0.56
DDX11-222	ENST00000542777	PSG1	P11464	419 aa		11.55	□□□□□ -0.56
DDX11-222	ENST00000542777	NMS	Q5H8A3	153 aa		11.55	□□□□□ -0.56
DDX11-222	ENST00000542777	OR51G1	Q8NGK1	321 aa		11.55	□□□□□ -0.56
DDX11-222	ENST00000542777	IL22RA2	Q969J5	263 aa		11.55	□□□□□ -0.56
DDX11-222	ENST00000542777	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.55	□□□□□ -0.56
DDX11-222	ENST00000542777	KCNIP3	Q9Y2W7	256 aa		11.55	□□□□□ -0.56
DDX11-222	ENST00000542777	ANXA7	P20073	488 aa	Known RBP	11.54	□□□□□ -0.56
DDX11-222	ENST00000542777	PPP1R1A	Q13522	171 aa		11.54	□□□□□ -0.56
DDX11-222	ENST00000542777		U3KQ87	197 aa		11.54	□□□□□ -0.56
DDX11-222	ENST00000542777	HECTD4	Q9Y4D8	3996 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	TRAV6	A0A075B6T7	132 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	CENPX	A8MT69	81 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	AMBP	P02760	352 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	HLA-DRB4	P13762	266 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	NKX2-1	P43699	371 aa	Predicted RBP	11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	LINC00336	Q6ZUF6	198 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	DTD1	Q8TEA8	209 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	RNF125	Q96EQ8	232 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	SCGB3A2	Q96PL1	93 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	PBDC1	Q9BVG4	233 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	C20orf85	Q9H1P6	137 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	RBKS	Q9H477	322 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	HLA-DRB4	X5D2U9	266 aa		11.53	□□□□□ -0.56
DDX11-222	ENST00000542777	TCRB	P04435	133 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	SMCO1	Q147U7	214 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	LGI3	Q8N145	548 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	NEU1	Q99519	415 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	NDUFAF3	Q9BU61	184 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	SCRT1	Q9BWW7	348 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	HSPB7	Q9UBY9	170 aa		11.52	□□□□□ -0.57
DDX11-222	ENST00000542777	PFDN2	Q9UHV9	154 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms