RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 BAGE3Q86Y29 109 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 SRSF12Q8WXF0 261 aaKnown RBP10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 SMIM12Q96EX1 92 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 PRORYQ9H606 182 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 PLXNB1O43157 2135 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 MAP1BP46821 2468 aaKnown RBP10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 TRAV34A0A0B4J273 112 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 LIPFP07098 398 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 NBEAP1P0C6P0 100 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 GP9P14770 177 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 SLC35B1P78383 322 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 OR10J3Q5JRS4 329 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 RASL11AQ6T310 242 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 FAM168AQ92567 244 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 GRAMD2BQ96HH9 432 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 CHRDL1Q9BU40 450 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 NDUFAF3Q9BU61 184 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 C7orf69Q9H7B7 122 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 KLF12Q9Y4X4 402 aa10.57□□□□□ -0.72
PRKAB1-206ENST00000541640 SLC25A5P05141 298 aaKnown RBP10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 GNG5P63218 68 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 GNB4Q9HAV0 340 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 ZZEF1O43149 2961 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 IGHV3-21A0A0B4J1V1 117 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 PGPA6NDG6 321 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 F2Z2F3 143 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 CA1P00915 261 aaPredicted RBP10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 UBE2G1P62253 170 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 MRPL54Q6P161 138 aaKnown RBP10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 Q6ZWC4 215 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 BLNKQ8WV28 456 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 C2orf88Q9BSF0 95 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 ONECUT1Q9UBC0 465 aa10.56□□□□□ -0.72
PRKAB1-206ENST00000541640 I3L2K1 104 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 IGLC1P0CG04 106 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 TPTE2P1Q5T6R2 138 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 SSBP3Q9BWW4 388 aaPredicted RBP10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 RAB1BQ9H0U4 201 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 POLR3KQ9Y2Y1 108 aaPredicted RBP10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 TLN1Q9Y490 2541 aaKnown RBP10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 BRS3P32247 399 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 KLRB1Q12918 225 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 USF2Q15853 346 aaPredicted RBP10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 LDLRAD2Q5SZI1 272 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 C1orf194Q5T5A4 169 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 C5orf17Q8NAS9 161 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 OR11H6Q8NGC7 330 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 ATG101Q9BSB4 218 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 ZNF331Q9NQX6 463 aaPredicted RBP10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 HIGD1AQ9Y241 93 aa10.55□□□□□ -0.72
PRKAB1-206ENST00000541640 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 BMPR1BO00238 502 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 TIMM23O14925 209 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 PLGLAQ15195 96 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 LBHQ53QV2 105 aaPredicted RBP10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 GPR82Q96P67 336 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 HSPB9Q9BQS6 159 aa10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 GSX1Q9H4S2 264 aaPredicted RBP10.54□□□□□ -0.72
PRKAB1-206ENST00000541640 PSG1P11464 419 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 HTR1DP28221 377 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 CDSNQ15517 529 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 LHFPL4Q7Z7J7 247 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 TIMD4Q96H15 378 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 FMC1Q96HJ9 113 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 MLST8Q9BVC4 326 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 TOMM40O96008 361 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 APCSP02743 223 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 GPX1P07203 203 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 LY6DQ14210 128 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 NUP35Q8NFH5 326 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 CFHR4Q92496 578 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 TBX15Q96SF7 602 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 SAMD10Q9BYL1 202 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 WNT10AQ9GZT5 417 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 Q9H3A6 140 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 CBLN4Q9NTU7 201 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 DPM3Q9P2X0 92 aa10.53□□□□□ -0.72
PRKAB1-206ENST00000541640 ZNF705FA8MVS1 300 aaPredicted RBP10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 M0R1W7 72 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 SRIP30626 198 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 MMDQ15546 238 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 ASPHD1Q5U4P2 390 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 PRR27Q6MZM9 219 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 KCNS1Q96KK3 526 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 NEU1Q99519 415 aa10.52□□□□□ -0.72
PRKAB1-206ENST00000541640 RASL11BQ9BPW5 248 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms