RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 DSCR4P56555 118 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-218ENST00000541615 UBE2D3P61077 147 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 UBE2D2P62837 147 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 UBE2L3P68036 154 aaKnown RBP4.2□□□□□ -1.74
SNHG1-218ENST00000541615 ARL16Q0P5N6 197 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 ASPHD1Q5U4P2 390 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 Q5XG85 94 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 AAED1Q7RTV5 226 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 HMGN2P46Q86SG4 172 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 SP8Q8IXZ3 490 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 FGFRL1Q8N441 504 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 IFI27L1Q96BM0 104 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 ZNF414Q96IQ9 312 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 HDHD3Q9BSH5 251 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-218ENST00000541615 CHCHD5Q9BSY4 110 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 PRRG4Q9BZD6 226 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 STARD5Q9NSY2 213 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 OCIAD1Q9NX40 245 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 C19orf25Q9UFG5 118 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-218ENST00000541615 PYGO1Q9Y3Y4 419 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 NUP205Q92621 2012 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 NCKAP5O14513 1909 aa4.2□□□□□ -1.74
SNHG1-218ENST00000541615 COL5A3P25940 1745 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-218ENST00000541615 ZNF831Q5JPB2 1677 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 TRBV20OR9-2A0A075B6H5 130 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 TRAV12-2A0A075B6T6 113 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 A0A0A6YYD4 124 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 CXorf51AA0A1B0GTR3 108 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 UBE2L5PA0A1B0GUS4 154 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 A0A1B0GXF2 115 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 TIMM23O14925 209 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 CD3EP07766 207 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 COX6A1P12074 109 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 ZNF823P16415 610 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 SSR4P51571 173 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 CCL11P51671 97 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 CTXN1P60606 82 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 CCL8P80075 99 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 CENPWQ5EE01 88 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 MFSD12Q6NUT3 480 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 STHQ8IWL8 128 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 HIST1H4GQ99525 98 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 NPCDR1Q9BY65 106 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 HEYLQ9NQ87 328 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-218ENST00000541615 EPDR1Q9UM22 224 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 SERP1Q9Y6X1 66 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 THSD7AQ9UPZ6 1657 aa4.19□□□□□ -1.74
SNHG1-218ENST00000541615 TRBV25-1A0A075B6N4 114 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 SMIM26A0A096LP01 95 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 RBAKDNA6NC62 111 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 SH2D7A6NKC9 451 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-218ENST00000541615 NCBP2LA6PVI3 153 aaKnown RBP4.18□□□□□ -1.74
SNHG1-218ENST00000541615 LGALS9O00182 355 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 CHEK1O14757 476 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 SLC25A20O43772 301 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 ZFAND5O76080 213 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 IGKV1D-33P01593 117 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 IGKV1-33P01594 117 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 CTLA4P16410 223 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 LOXP28300 417 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-218ENST00000541615 LEPP41159 167 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 NBL1P41271 181 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 DLX1P56177 255 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 NPC2P61916 151 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 LOXL1Q08397 574 aaPredicted RBP4.18□□□□□ -1.74
SNHG1-218ENST00000541615 TWIST1Q15672 202 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 CST6Q15828 149 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 VMA21Q3ZAQ7 101 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 RAB42Q8N4Z0 105 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 DRAM1Q8N682 238 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 PRSS3P2Q8NHM4 247 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 RITA1Q96K30 269 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 TRGV9Q99603 122 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 PLA2G2FQ9BZM2 168 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 PRDM14Q9GZV8 571 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 ZNF442Q9H7R0 627 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 PKIGQ9Y2B9 76 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 LHFPL6Q9Y693 200 aa4.18□□□□□ -1.74
SNHG1-218ENST00000541615 TNS1Q9HBL0 1735 aaKnown RBP4.18□□□□□ -1.74
SNHG1-218ENST00000541615 LCTP09848 1927 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 CASP8AP2Q9UKL3 1982 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 IGHV3OR15-7A0A075B7D8 119 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 TRAV17A0A0B4J275 112 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 A0A0J9YW62 118 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 A0A1B0GTH9 108 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM236DA0A1B0GTK5 79 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A10PA6NDY2 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A20PA6NIJ5 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A7PA6NKC0 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A22PA8MWA6 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A12PA8MX19 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A23PA8MXZ1 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 TM4SF5O14894 197 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 HBDP02042 147 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A15PP0C7V4 464 aa4.17□□□□□ -1.74
SNHG1-218ENST00000541615 FAM90A13PP0C7W8 464 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms