RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 SAP25Q8TEE9 199 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 IGF2BP2-AS1Q96M15 143 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 SIGLEC9Q9Y336 463 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 RP1P56715 2156 aa7.7□□□□□ -1.18
CLIP1-214ENST00000540539 LINC01548A6NM66 108 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 DLL1O00548 723 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 RRN3P1Q2M238 152 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 PLPPR2Q96GM1 343 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 LINC01587Q99440 93 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 EMC6Q9BV81 110 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 KLRF1Q9NZS2 232 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 HIGD1BQ9P298 99 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 ZFHX2Q9C0A1 2572 aaPredicted RBP7.69□□□□□ -1.18
CLIP1-214ENST00000540539 UNC13CQ8NB66 2214 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 TMEM213A2RRL7 107 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 MS4A18H0YCH9 400 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 CRLF1O75462 422 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 ZNF688P0C7X2 276 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 HHEXQ03014 270 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 MRPL23Q16540 153 aaKnown RBP7.69□□□□□ -1.18
CLIP1-214ENST00000540539 MS4A18Q3C1V0 323 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 ATP5L2Q7Z4Y8 100 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 CEND1Q8N111 149 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 SNRNP40Q96DI7 357 aaKnown RBP7.69□□□□□ -1.18
CLIP1-214ENST00000540539 TM4SF19Q96DZ7 209 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 ENY2Q9NPA8 101 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 OBP2BQ9NPH6 170 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 MDFICQ9P1T7 246 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 ESPL1Q14674 2120 aa7.69□□□□□ -1.18
CLIP1-214ENST00000540539 ZG16O60844 167 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 PRR30Q53SZ7 412 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-214ENST00000540539 MIC13Q5XKP0 118 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 ZNF474Q6S9Z5 364 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-214ENST00000540539 C17orf82Q86X59 251 aaPredicted RBP7.68□□□□□ -1.18
CLIP1-214ENST00000540539 TMED7-TICAM2A0A0A6YYA0 188 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 F5H768 121 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 TGFBR3LH3BV60 316 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 SNCGO76070 127 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 HBBP68871 147 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 C12orf74Q32Q52 190 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 FADS6Q8N9I5 356 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 OR8A1Q8NGG7 326 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 TTTY13Q9BZ97 58 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 FBXL15Q9H469 300 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 ZNF407Q9C0G0 2248 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 ZNF292O60281 2723 aa7.68□□□□□ -1.18
CLIP1-214ENST00000540539 C5orf49A4QMS7 147 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 MPV17P39210 176 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 NBL1P41271 181 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 RBM11P57052 281 aaKnown RBP7.67□□□□□ -1.18
CLIP1-214ENST00000540539 MFAP5Q13361 173 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.67□□□□□ -1.18
CLIP1-214ENST00000540539 PCSK4Q6UW60 755 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 Q6ZQT7 251 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 TEN1Q86WV5 123 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 ABHD12Q8N2K0 398 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 LINC00479Q96M42 142 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 PIMREGQ9BSJ6 248 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 AGRNO00468 2067 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 TMEM262E9PQX1 116 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 DUX1O43812 170 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 MYF5P13349 255 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 COL8A1P27658 744 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 CACNG7P62955 275 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 LGALS9BQ3B8N2 356 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 LGALS9CQ6DKI2 356 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 DUX5Q96PT3 197 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 TCF19Q9Y242 345 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 FAM186AA6NE01 2351 aa7.67□□□□□ -1.18
CLIP1-214ENST00000540539 IGLV2-14P01704 120 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 CELA2AP08217 269 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 ZNF883P0CG24 379 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 FAM214BQ7L5A3 538 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 PPP1R27Q86WC6 154 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 FGFRL1Q8N441 504 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 MGST2Q99735 147 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 HEYLQ9NQ87 328 aaPredicted RBP7.66□□□□□ -1.18
CLIP1-214ENST00000540539 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 ALKBH4Q9NXW9 302 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 GGTLC3B5MD39 225 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 F8WDY8 70 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 GP1BBP13224 206 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 EFNB3Q15768 340 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 POU2AF1Q16633 256 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 SPINK9Q5DT21 86 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 Q6Q795 121 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 RASL11BQ9BPW5 248 aa7.66□□□□□ -1.18
CLIP1-214ENST00000540539 MRPL32Q9BYC8 188 aaKnown RBP7.66□□□□□ -1.18
CLIP1-214ENST00000540539 IGKV2D-26A0A0A0MRZ7 120 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 KIR2DS1A0A191URI9 304 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 LILRA5A6NI73 299 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 CDX4O14627 284 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-214ENST00000540539 CLRN1P58418 232 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 RPL30P62888 115 aaKnown RBP7.65□□□□□ -1.18
CLIP1-214ENST00000540539 KIR2DS1Q14954 304 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 FAM231DQ6ZW35 169 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 PTPRZ1P23471 2315 aaPredicted RBP7.65□□□□□ -1.18
CLIP1-214ENST00000540539 SPEGQ15772 3267 aa7.65□□□□□ -1.18
CLIP1-214ENST00000540539 GVINP1Q7Z2Y8 2422 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms