RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 VPS25Q9BRG1 176 aa9.07□□□□□ -0.96
CPT1A-206ENST00000540367 RPP21Q9H633 154 aaKnown RBP9.07□□□□□ -0.96
CPT1A-206ENST00000540367 RPUSD1Q9UJJ7 312 aaKnown RBP9.07□□□□□ -0.96
CPT1A-206ENST00000540367 SOX21Q9Y651 276 aaPredicted RBP9.07□□□□□ -0.96
CPT1A-206ENST00000540367 TAX1BP3O14907 124 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 ZNF883P0CG24 379 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 TCF24Q7RTU0 167 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 KLF12Q9Y4X4 402 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 RAI1Q7Z5J4 1906 aaPredicted RBP9.06□□□□□ -0.96
CPT1A-206ENST00000540367 IGKV1D-37A0A075B6S9 117 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 LEPROTL1O95214 131 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 FOXA3P55318 350 aaPredicted RBP9.06□□□□□ -0.96
CPT1A-206ENST00000540367 CT83Q5H943 113 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 BVES-AS1Q5T3Y7 98 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 SLC25A34Q6PIV7 304 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 PDPNQ86YL7 162 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 FAM169BQ8N8A8 192 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 RND1Q92730 232 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 HARBI1Q96MB7 349 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 GPR82Q96P67 336 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 GAFA1Q96PS6 74 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 FNDC4Q9H6D8 234 aaPredicted RBP9.06□□□□□ -0.96
CPT1A-206ENST00000540367 PLSCR4Q9NRQ2 329 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 ZNRD1Q9P1U0 126 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 WASHC3Q9Y3C0 194 aa9.06□□□□□ -0.96
CPT1A-206ENST00000540367 ZNF318Q5VUA4 2279 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 TACC2O95359 2948 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 hDV102S1A0JD36 115 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 A8MWL6 223 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 M0QZ24 198 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 SPRY3O43610 288 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 SLC25A5P05141 298 aaKnown RBP9.05□□□□□ -0.96
CPT1A-206ENST00000540367 PRR31Q5SQ13 230 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 VHLLQ6RSH7 139 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 ZNF833PQ6ZTB9 187 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 BHLHA15Q7RTS1 189 aaPredicted RBP9.05□□□□□ -0.96
CPT1A-206ENST00000540367 THAP8Q8NA92 274 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 NPIPB3Q92617 1050 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 MLST8Q9BVC4 326 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 PRSS22Q9GZN4 317 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 TMEM191AQ9H0A3 160 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 ZNF71Q9NQZ8 489 aaPredicted RBP9.05□□□□□ -0.96
CPT1A-206ENST00000540367 DKK4Q9UBT3 224 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 SLC25A15Q9Y619 301 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 TM4SF5O14894 197 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 NUDT3O95989 172 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 APOA2P02652 100 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 OCIAD2Q56VL3 154 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 LINC00305Q7Z4B0 112 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 DEFB125Q8N687 156 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 CST9LQ9H4G1 147 aa9.05□□□□□ -0.96
CPT1A-206ENST00000540367 CBY3A6NI87 242 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 E7EUB6 86 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 GATA4P43694 442 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 STXBP6Q8NFX7 210 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 MRPL20Q9BYC9 149 aaKnown RBP9.04□□□□□ -0.96
CPT1A-206ENST00000540367 ZNF492Q9P255 531 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 RNF7Q9UBF6 113 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 C19orf71A6NCJ1 209 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 HSBP1L1C9JCN9 74 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 CIDEAO60543 219 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 MOSP00540 346 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 PLAUP00749 431 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 HLA-DRB1P01911 266 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 WT1-ASQ06250 92 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 TMEM177Q53S58 311 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 LDLRAD2Q5SZI1 272 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 C12orf54Q6X4T0 127 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 LINC00322Q6ZN03 302 aaPredicted RBP9.04□□□□□ -0.96
CPT1A-206ENST00000540367 ERASQ7Z444 233 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 RBMXL3Q8N7X1 1067 aaKnown RBP9.04□□□□□ -0.96
CPT1A-206ENST00000540367 FDCSPQ8NFU4 85 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 GFRA4Q9GZZ7 299 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 SCRT2Q9NQ03 307 aa9.04□□□□□ -0.96
CPT1A-206ENST00000540367 PGPA6NDG6 321 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 P01737 135 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 LIPFP07098 398 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 OR5AL1P0C617 328 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 CD24P25063 80 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 PET117Q6UWS5 81 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 FAM216BQ8N7L0 139 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 PERPQ96FX8 193 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 FMC1Q96HJ9 113 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 PGLYRP4Q96LB8 373 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 CCL13Q99616 98 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 PROCRQ9UNN8 238 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 OR2T8A6NH00 312 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 CGB1A6NKQ9 187 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 K7ERU9 68 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 LTAP01374 205 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 IGHV3-48P01763 117 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 SUB1P53999 127 aaKnown RBP eCLIP9.03□□□□□ -0.965e-6■■■■■ 28.3
CPT1A-206ENST00000540367 MUC21Q5SSG8 566 aa9.03□□□□□ -0.96
CPT1A-206ENST00000540367 ZNF788Q6ZQV5 615 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms