RNA–Protein interactions for RNA: ENST00000540304.5

CLIP1-212, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5

Gene CLIP1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-212ENST00000540304 M0QXV9 152 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 TGFAP01135 160 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 SRP19P09132 144 aaKnown RBP7.77□□□□□ -1.16
CLIP1-212ENST00000540304 CD33P20138 364 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 ACOT6Q3I5F7 207 aaPredicted RBP7.77□□□□□ -1.16
CLIP1-212ENST00000540304 SOHLH1Q5JUK2 328 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 VCX2Q9H322 139 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 SLC25A22Q9H936 323 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 NPVFQ9HCQ7 196 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 NDUFA4L2Q9NRX3 87 aa7.77□□□□□ -1.16
CLIP1-212ENST00000540304 IGHV1-3A0A0C4DH29 117 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 PPP5D1E7EU14 171 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 INS-IGF2F8WCM5 200 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 M0R1W7 72 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 ENSAO43768 121 aaKnown RBP7.77□□□□□ -1.17
CLIP1-212ENST00000540304 IFNA1P01562 189 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 BCL2P10415 239 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 OPRK1P41145 380 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 EFNA4P52798 201 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 C2orf83Q53S99 150 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 COA6Q5JTJ3 125 aaKnown RBP7.77□□□□□ -1.17
CLIP1-212ENST00000540304 PNKDQ8N490 385 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 RPEQ96AT9 228 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 MGST2Q99735 147 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 GEMIN7Q9H840 131 aaKnown RBP7.77□□□□□ -1.17
CLIP1-212ENST00000540304 KCNIP2Q9NS61 270 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 LSM4Q9Y4Z0 139 aaKnown RBP7.77□□□□□ -1.17
CLIP1-212ENST00000540304 INSIG2Q9Y5U4 225 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 CACNA1BQ00975 2339 aa7.77□□□□□ -1.17
CLIP1-212ENST00000540304 IGHV3-72A0A0B4J1Y9 119 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 ZFP92A6NM28 416 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 MOB3BQ86TA1 216 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 GGTLC1Q9BX51 225 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 MYO18BQ8IUG5 2567 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 TRAV34A0A0B4J273 112 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 K7EQM0 130 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 NDUFS7O75251 213 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 RNASE2P10153 161 aaKnown RBP7.76□□□□□ -1.17
CLIP1-212ENST00000540304 RANP62826 216 aaKnown RBP7.76□□□□□ -1.17
CLIP1-212ENST00000540304 ERHP84090 104 aaKnown RBP7.76□□□□□ -1.17
CLIP1-212ENST00000540304 TMEM183BQ1AE95 376 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 KIAA1644Q3SXP7 199 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 TEPPQ6URK8 271 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 IGFBPL1Q8WX77 278 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
CLIP1-212ENST00000540304 RITA1Q96K30 269 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 PSG8Q9UQ74 426 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 USP24Q9UPU5 2620 aa7.76□□□□□ -1.17
CLIP1-212ENST00000540304 USP9XQ93008 2570 aaPredicted RBP7.75□□□□□ -1.17
CLIP1-212ENST00000540304 LY6LH3BQJ8 138 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 PAFAH1B2P68402 229 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 CYB561D1Q8N8Q1 229 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 TEX45Q8NA69 505 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 FER1L6-AS1Q8NA97 138 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 OR11H6Q8NGC7 330 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 THYN1Q9P016 225 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 PXMP4Q9Y6I8 212 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 C1orf159Q96HA4 380 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 TPSG1Q9NRR2 321 aa7.75□□□□□ -1.17
CLIP1-212ENST00000540304 CGB1A6NKQ9 187 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 E7EUB6 86 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 PRTN3P24158 256 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 HTR1DP28221 377 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 RPL32P62910 135 aaKnown RBP7.74□□□□□ -1.17
CLIP1-212ENST00000540304 GCSAMLQ5JQS6 135 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 C10orf55Q5SWW7 151 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 MIC13Q5XKP0 118 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 MMD2Q8IY49 270 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 KIR3DL3Q8N743 410 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 P2RX4Q99571 388 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 VAMP8Q9BV40 100 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 SPG11Q96JI7 2443 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 CELSR2Q9HCU4 2923 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 A0A1W2PPI3 338 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 CRYGBP07316 175 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 ESDP10768 282 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 PSG5Q15238 335 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 MRGPRG-AS1Q2M3A8 158 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 C5orf17Q8NAS9 161 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 SIGMAR1Q99720 223 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 ABCA1O95477 2261 aa7.74□□□□□ -1.17
CLIP1-212ENST00000540304 A0A087WWC5 75 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 OVOL3O00110 214 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 PDE6DO43924 150 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 HNRNPA3P51991 378 aaKnown RBP7.73□□□□□ -1.17
CLIP1-212ENST00000540304 SUB1P53999 127 aaKnown RBP eCLIP7.73□□□□□ -1.17
CLIP1-212ENST00000540304 WT1-ASQ06250 92 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 CD69Q07108 199 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 SSMEM1Q8WWF3 244 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 RNF5Q99942 180 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 MANBALQ9NQG1 85 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 DPM3Q9P2X0 92 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 HELTA6NFD8 242 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 ODF3BA8MYP8 253 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 H3BQ15 152 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 ACTL6BO94805 426 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 CNTFRP26992 372 aa7.73□□□□□ -1.17
CLIP1-212ENST00000540304 PSMB3P49720 205 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms