RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 EIF2B2P49770 351 aaKnown RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 CCR6P51684 374 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 AP2S1P53680 142 aaPredicted RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 H2BFWTQ7Z2G1 175 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 OR51S1Q8NGJ8 323 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 TMEM230Q96A57 120 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 SEC22AQ96IW7 307 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 PRRT1Q99946 306 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 NIPSNAP3BQ9BS92 247 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 ZNF2Q9BSG1 426 aaPredicted RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 FAM212BQ9NTI7 297 aaPredicted RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 EHFQ9NZC4 300 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 SCP2D1Q9UJQ7 156 aa8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
CLSTN3-209ENST00000539982 A0A1B0GVG6 124 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 GPR31O00270 319 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 CLN5O75503 358 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 NDUFB6O95139 128 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 SNCAP37840 140 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 FAM222AQ5U5X8 452 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 ARRDC1Q8N5I2 433 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 SEPSECSQ9HD40 501 aaKnown RBP8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 TMED3Q9Y3Q3 217 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 RFNGQ9Y644 331 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 U3KQE9 123 aa8.24□□□□□ -1.09
CLSTN3-209ENST00000539982 NBDYA0A0U1RRE5 68 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 CORTO00230 105 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 HTN3P15516 51 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 TSPAN5P62079 268 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 SNRPD3P62318 126 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 SCGB2B2Q4G0G5 96 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 TMEM88Q6PEY1 159 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 C16orf54Q6UWD8 224 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 MARVELD1Q9BSK0 173 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 C20orf85Q9H1P6 137 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 NUDT15Q9NV35 164 aa8.23□□□□□ -1.09
CLSTN3-209ENST00000539982 hCG_2014768A0A024R1R8 64 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 TRAV6A0A075B6T7 132 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 FAM90A26D6RGX4 464 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 INMT-MINDY4F8WBC2 141 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 INS-IGF2F8WCM5 200 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 SCGB2A1O75556 95 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 H2AFB2P0C5Z0 115 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 SUB1P53999 127 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 MLANAQ16655 118 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 OR13C8Q8NGS7 320 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 OR6F1Q8NGZ6 308 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 OR4X1Q8NH49 305 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 TERB2Q8NHR7 220 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 GLMPQ8WWB7 406 aa8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 MRPL36Q9P0J6 103 aaKnown RBP8.22□□□□□ -1.09
CLSTN3-209ENST00000539982 DNAH5Q8TE73 4624 aa8.21□□□□□ -1.09
CLSTN3-209ENST00000539982 IGHV3OR16-12A0A075B7B8 117 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 TRAV30A0A087WSZ9 112 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 IGKV1-39P01597 117 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 IGKV1-17P01599 117 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 IGKV1D-39P04432 117 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 HLA-DRB4P13762 266 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 S100GP29377 79 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 HOXA1P49639 335 aaPredicted RBP8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 PHLDA2Q53GA4 152 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 SPINK9Q5DT21 86 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 LPCAT3Q6P1A2 487 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 SPATA12Q7Z6I5 190 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 LHFPL1Q86WI0 220 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 C15orf53Q8NAA6 179 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 ATG101Q9BSB4 218 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 FNDC4Q9H6D8 234 aaPredicted RBP8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 FLVCR2Q9UPI3 526 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 HLA-DRB4X5D2U9 266 aa8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.1
CLSTN3-209ENST00000539982 HNRNPCP07910 306 aaKnown RBP eCLIP8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 RNASE2P10153 161 aaKnown RBP8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 NKX2-1P43699 371 aaPredicted RBP8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 TIGITQ495A1 244 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 TBC1D26Q86UD7 250 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 ZNRF2Q8NHG8 242 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 MRGPRFQ96AM1 343 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 SCGB3A2Q96PL1 93 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 FXYD6Q9H0Q3 95 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 NRN1Q9NPD7 142 aa8.2□□□□□ -1.1
CLSTN3-209ENST00000539982 PRAF2O60831 178 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 PGAM2P15259 253 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 ANXA7P20073 488 aaKnown RBP8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 OPRK1P41145 380 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 FXYD7P58549 80 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 SURF2Q15527 256 aaPredicted RBP8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 IZUMO4Q1ZYL8 232 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 GSG1LQ6UXU4 331 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 SLC35G3Q8N808 338 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 MARCH1Q8TCQ1 289 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 Q8WTZ3 238 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 YTHDF2Q9Y5A9 579 aaKnown RBP8.19□□□□□ -1.1
CLSTN3-209ENST00000539982 A0A0B4J293 547 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 IGKV3-20P01619 116 aa8.18□□□□□ -1.1
CLSTN3-209ENST00000539982 HBE1P02100 147 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms