RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 SLC25A5P05141 298 aaKnown RBP14.22□□□□□ -0.13
RAB40C-205ENST00000539661 GNG5P63218 68 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 CNEP1R1Q8N9A8 125 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 TP73-AS1Q9UF72 201 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 RNF24Q9Y225 148 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 DSCAML1Q8TD84 2053 aa14.22□□□□□ -0.13
RAB40C-205ENST00000539661 LOC102724200A0A096LPH7 203 aaPredicted RBP14.21□□□□□ -0.13
RAB40C-205ENST00000539661 P01737 135 aa14.21□□□□□ -0.13
RAB40C-205ENST00000539661 PSG9Q00887 426 aa14.21□□□□□ -0.13
RAB40C-205ENST00000539661 MOGAT3Q86VF5 341 aa14.21□□□□□ -0.13
RAB40C-205ENST00000539661 GTSF1Q8WW33 167 aa14.21□□□□□ -0.13
RAB40C-205ENST00000539661 TMEM164Q5U3C3 297 aa14.21□□□□□ -0.14
RAB40C-205ENST00000539661 ERASQ7Z444 233 aa14.21□□□□□ -0.14
RAB40C-205ENST00000539661 FAM169BQ8N8A8 192 aa14.21□□□□□ -0.14
RAB40C-205ENST00000539661 CDX4O14627 284 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-205ENST00000539661 TM4SF5O14894 197 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 MOSP00540 346 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 KIR2DL2P43627 348 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-205ENST00000539661 SUB1P53999 127 aaKnown RBP eCLIP14.2□□□□□ -0.14
RAB40C-205ENST00000539661 PERPQ96FX8 193 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 RPUSD1Q9UJJ7 312 aaKnown RBP14.2□□□□□ -0.14
RAB40C-205ENST00000539661 TANC2Q9HCD6 1990 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 IGKV1D-37A0A075B6S9 117 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 LTAP01374 205 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 GPR183P32249 361 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 SSBP2P81877 361 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-205ENST00000539661 LINC01545Q5VT33 79 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 LINC00305Q7Z4B0 112 aa14.2□□□□□ -0.14
RAB40C-205ENST00000539661 RBMXL3Q8N7X1 1067 aaKnown RBP14.2□□□□□ -0.14
RAB40C-205ENST00000539661 GAGE12BA1L429 117 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 PGPA6NDG6 321 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 M0R296 226 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 OR4A5Q8NH83 315 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 NPIPB3Q92617 1050 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 PGLYRP4Q96LB8 373 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 CSTL1Q9H114 145 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 CHEK1O14757 476 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 APOA2P02652 100 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 COX8AP10176 69 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 SEC11AP67812 179 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 ZNF833PQ6ZTB9 187 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 C5orf17Q8NAS9 161 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 PIEZO2Q9H5I5 2752 aa14.19□□□□□ -0.14
RAB40C-205ENST00000539661 IGHG3P01860 377 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 SRSF6Q13247 344 aaKnown RBP14.18□□□□□ -0.14
RAB40C-205ENST00000539661 TMEM177Q53S58 311 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 ALKBH2Q6NS38 261 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 LINC00322Q6ZN03 302 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-205ENST00000539661 DAZAP1Q96EP5 407 aaKnown RBP14.18□□□□□ -0.14
RAB40C-205ENST00000539661 FNDC4Q9H6D8 234 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-205ENST00000539661 DKK4Q9UBT3 224 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 NPIPB6E9PJ23 425 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 HAX1O00165 279 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 HARBI1Q96MB7 349 aa14.18□□□□□ -0.14
RAB40C-205ENST00000539661 ZCCHC24Q8N2G6 241 aaKnown RBP14.17□□□□□ -0.14
RAB40C-205ENST00000539661 TMEM167AQ8TBQ9 72 aa14.17□□□□□ -0.14
RAB40C-205ENST00000539661 TNCP24821 2201 aa14.17□□□□□ -0.14
RAB40C-205ENST00000539661 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.17□□□□□ -0.14
RAB40C-205ENST00000539661 IGLC1P0CG04 106 aa14.17□□□□□ -0.14
RAB40C-205ENST00000539661 GATA4P43694 442 aa14.17□□□□□ -0.14
RAB40C-205ENST00000539661 SPRNQ5BIV9 151 aa14.17□□□□□ -0.14
RAB40C-205ENST00000539661 DPF1Q92782 380 aa14.17□□□□□ -0.14
RAB40C-205ENST00000539661 A0A087X0K7 114 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 NBEAP1P0C6P0 100 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 CD59P13987 128 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 MSMPQ1L6U9 139 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 VSTM2AQ8TAG5 236 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 ITLN1Q8WWA0 313 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 PLSCR4Q9NRQ2 329 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 KALRNO60229 2985 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 TRAV8-6A0A0B4J262 113 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 BPIFA4PQ86YQ2 179 aa14.16□□□□□ -0.14
RAB40C-205ENST00000539661 WT1-ASQ06250 92 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 RNF7Q9UBF6 113 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 TCRAP04437 139 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 CD24P25063 80 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 ARF6P62330 175 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 C2orf91Q6ZV80 131 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 C9orf106Q8NAJ2 232 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 OR5AN1Q8NGI8 311 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 BLNKQ8WV28 456 aa14.15□□□□□ -0.14
RAB40C-205ENST00000539661 C7orf71A4D174 169 aa14.14□□□□□ -0.15
RAB40C-205ENST00000539661 APOHP02749 345 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-205ENST00000539661 NEU4Q8WWR8 484 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-205ENST00000539661 SGK494Q96LW2 274 aa14.14□□□□□ -0.15
RAB40C-205ENST00000539661 MRPL20Q9BYC9 149 aaKnown RBP14.14□□□□□ -0.15
RAB40C-205ENST00000539661 DSCAMO60469 2012 aa14.14□□□□□ -0.15
RAB40C-205ENST00000539661 ZNF137PP52743 207 aa14.14□□□□□ -0.15
RAB40C-205ENST00000539661 BHLHA15Q7RTS1 189 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-205ENST00000539661 RND1Q92730 232 aa14.14□□□□□ -0.15
RAB40C-205ENST00000539661 FLYWCH2Q96CP2 140 aaKnown RBP14.14□□□□□ -0.15
RAB40C-205ENST00000539661 TMUB1Q9BVT8 246 aa14.14□□□□□ -0.15
RAB40C-205ENST00000539661 ZNF71Q9NQZ8 489 aaPredicted RBP14.14□□□□□ -0.15
RAB40C-205ENST00000539661 E7EUB6 86 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 TMEM97Q5BJF2 176 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 DUX4L9Q6RFH8 374 aaPredicted RBP14.13□□□□□ -0.15
RAB40C-205ENST00000539661 C16orf54Q6UWD8 224 aa14.13□□□□□ -0.15
RAB40C-205ENST00000539661 GTF2H5Q6ZYL4 71 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms