RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 A0A1B0GW15 77 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 LINC00473A8K010 186 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.5
CACNB1-206ENST00000539338 CMC4P56277 68 aaPredicted RBP11.96□□□□□ -0.5
CACNB1-206ENST00000539338 PVRIGQ6DKI7 326 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 MGST2Q99735 147 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 PSG8Q9UQ74 426 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 GPR179Q6PRD1 2367 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 TRAV1-1A0A0B4J248 108 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 TMEM14EPQ6UXP3 125 aa11.96□□□□□ -0.5
CACNB1-206ENST00000539338 ATP5LO75964 103 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 Q6P435 159 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 TMEM242Q9NWH2 141 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 NPFFO15130 113 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 NDUFA3O95167 84 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 LEPP41159 167 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 SRSF4Q08170 494 aaKnown RBP11.95□□□□□ -0.5
CACNB1-206ENST00000539338 TTC9CQ8N5M4 171 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 HS3ST6Q96QI5 342 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 FABP5P3A8MUU1 101 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 AMBPP02760 352 aa11.95□□□□□ -0.5
CACNB1-206ENST00000539338 ADCYAP1P18509 176 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
CACNB1-206ENST00000539338 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 RHOGP84095 191 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 LINC01551Q86U37 167 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 COQ2Q96H96 371 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 AGMATQ9BSE5 352 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 A0A1B0GW64 132 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 SRSF6Q13247 344 aaKnown RBP11.94□□□□□ -0.5
CACNB1-206ENST00000539338 TMEM200BQ69YZ2 307 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 CACNA1HO95180 2353 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 GZMBP10144 247 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 Q6ZRM9 215 aa11.94□□□□□ -0.5
CACNB1-206ENST00000539338 MRPL16Q9NX20 251 aaKnown RBP11.94□□□□□ -0.5
CACNB1-206ENST00000539338 LRRK1Q38SD2 2015 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 A0A0G2JNJ9 132 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 PCP4P48539 62 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
CACNB1-206ENST00000539338 Q71RC1 249 aaPredicted RBP11.93□□□□□ -0.5
CACNB1-206ENST00000539338 Q9UFV3 132 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 PPP1R17O96001 155 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 LINC00614P0C842 121 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 PAPPA-AS1Q5QFB9 102 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 SLC25A15Q9Y619 301 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
CACNB1-206ENST00000539338 TNFRSF18Q9Y5U5 241 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 TMEM50AO95807 157 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 MDS2Q8NDY4 140 aa11.93□□□□□ -0.5
CACNB1-206ENST00000539338 J3QLI3 93 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 COLCA1Q6ZS62 124 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 TSKUQ8WUA8 353 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 ITLN2Q8WWU7 325 aaPredicted RBP11.92□□□□□ -0.5
CACNB1-206ENST00000539338 ZNF524Q96C55 264 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 LINC00527Q9UJ94 153 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 DEFB113Q30KQ7 82 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 ZNF257Q9Y2Q1 563 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 MYO7BQ6PIF6 2116 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 IGHV2-26A0A0B4J1V2 119 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 NTF4P34130 210 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 FOXL2NBQ6ZUU3 175 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 NIT1Q86X76 327 aa11.92□□□□□ -0.5
CACNB1-206ENST00000539338 NLRC5Q86WI3 1866 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.91□□□□□ -0.5
CACNB1-206ENST00000539338 LYL1P12980 280 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 DUX3Q96PT4 197 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 DOCK8Q8NF50 2099 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 TRBV6-6A0A0A6YYG2 114 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 EXOC3-AS1Q8N2X6 119 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 OR10J3Q5JRS4 329 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 SPOCK3Q9BQ16 436 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 PRORYQ9H606 182 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 A0A1B0GUS0 222 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 PMS2P5A8MQ11 134 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 MOB4Q9Y3A3 225 aa11.91□□□□□ -0.5
CACNB1-206ENST00000539338 TRAV9-2A0A087WT02 112 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 IGHV1-8P0DP01 117 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 EVI2AP22794 236 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 NEUROG1Q92886 237 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 MRAP2Q96G30 205 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 ASCL2Q99929 193 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 SCRT1Q9BWW7 348 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 SELENOKQ9Y6D0 94 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 PSG1P11464 419 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 ZNF672Q499Z4 452 aaPredicted RBP11.9□□□□□ -0.5
CACNB1-206ENST00000539338 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.5
CACNB1-206ENST00000539338 APOMO95445 188 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 SLC50A1Q9BRV3 221 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 FANCMQ8IYD8 2048 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 H7C1H1 209 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 DTX1Q86Y01 620 aa11.9□□□□□ -0.5
CACNB1-206ENST00000539338 MBD3L4A6NDZ8 208 aaPredicted RBP11.9□□□□□ -0.51
CACNB1-206ENST00000539338 MBD3L3A6NE82 208 aaPredicted RBP11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms