RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SVEP1Q4LDE5 3571 aa19.84■□□□□ 0.77
RAB40C-204ENST00000538492 F2Z2F3 143 aa19.84■□□□□ 0.77
RAB40C-204ENST00000538492 CD24P25063 80 aa19.84■□□□□ 0.77
RAB40C-204ENST00000538492 CORTO00230 105 aa19.83■□□□□ 0.77
RAB40C-204ENST00000538492 LINC00310P59036 64 aa19.83■□□□□ 0.77
RAB40C-204ENST00000538492 MMDQ15546 238 aa19.83■□□□□ 0.77
RAB40C-204ENST00000538492 PRR27Q6MZM9 219 aa19.83■□□□□ 0.77
RAB40C-204ENST00000538492 LY6G5BQ8NDX9 201 aa19.83■□□□□ 0.77
RAB40C-204ENST00000538492 SERF1AO75920 110 aa19.83■□□□□ 0.76
RAB40C-204ENST00000538492 CNIH1O95406 144 aa19.83■□□□□ 0.76
RAB40C-204ENST00000538492 SLC25A5P05141 298 aaKnown RBP19.83■□□□□ 0.76
RAB40C-204ENST00000538492 KLRD1Q13241 179 aa19.83■□□□□ 0.76
RAB40C-204ENST00000538492 A0A1W2PRD5 423 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 A0A1W2PRF3 423 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 A0A1W2PRM7 423 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 SMIM27A0A1W2PRY6 76 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 PGPA6NDG6 321 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 MYCNOSP40205 109 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 KIAA1644Q3SXP7 199 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 STXBP6Q8NFX7 210 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 C14orf144Q96I85 54 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 MS4A10Q96PG2 267 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 SPTBN1Q01082 2364 aaKnown RBP19.82■□□□□ 0.76
RAB40C-204ENST00000538492 SCGB1D1O95968 90 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 NBEAP1P0C6P0 100 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 TPTE2P1Q5T6R2 138 aa19.82■□□□□ 0.76
RAB40C-204ENST00000538492 HTR1DP28221 377 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 BAGE3Q86Y29 109 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 TIMD4Q96H15 378 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 TRBV9A0A0B4J1U6 114 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 CD33P20138 364 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 TMEM136Q6ZRR5 245 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 WNT10AQ9GZT5 417 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 CBLN4Q9NTU7 201 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 EPDR1Q9UM22 224 aa19.81■□□□□ 0.76
RAB40C-204ENST00000538492 PSG1P11464 419 aa19.8■□□□□ 0.76
RAB40C-204ENST00000538492 LYZP61626 148 aa19.8■□□□□ 0.76
RAB40C-204ENST00000538492 RPL19P84098 196 aaKnown RBP19.8■□□□□ 0.76
RAB40C-204ENST00000538492 UBE2G1P62253 170 aa19.79■□□□□ 0.76
RAB40C-204ENST00000538492 IQCJQ1A5X6 159 aa19.79■□□□□ 0.76
RAB40C-204ENST00000538492 FAM103A1Q9BTL3 118 aaKnown RBP19.79■□□□□ 0.76
RAB40C-204ENST00000538492 IGLC1P0CG04 106 aa19.79■□□□□ 0.76
RAB40C-204ENST00000538492 GP9P14770 177 aa19.79■□□□□ 0.76
RAB40C-204ENST00000538492 WDR73Q6P4I2 378 aa19.79■□□□□ 0.76
RAB40C-204ENST00000538492 DPM3Q9P2X0 92 aa19.79■□□□□ 0.76
RAB40C-204ENST00000538492 I3L2K1 104 aa19.78■□□□□ 0.76
RAB40C-204ENST00000538492 NUDT10Q8NFP7 164 aa19.78■□□□□ 0.76
RAB40C-204ENST00000538492 NUDT11Q96G61 164 aa19.78■□□□□ 0.76
RAB40C-204ENST00000538492 CHD8Q9HCK8 2581 aa19.78■□□□□ 0.76
RAB40C-204ENST00000538492 GATCO43716 136 aaKnown RBP19.78■□□□□ 0.76
RAB40C-204ENST00000538492 RNF5Q99942 180 aa19.78■□□□□ 0.76
RAB40C-204ENST00000538492 MT-ND6P03923 174 aa19.77■□□□□ 0.76
RAB40C-204ENST00000538492 AMY1AP04745 511 aa19.77■□□□□ 0.76
RAB40C-204ENST00000538492 TMEM183BQ1AE95 376 aa19.77■□□□□ 0.76
RAB40C-204ENST00000538492 FBLN7Q53RD9 439 aa19.77■□□□□ 0.76
RAB40C-204ENST00000538492 GNB4Q9HAV0 340 aa19.77■□□□□ 0.76
RAB40C-204ENST00000538492 HIGD1AQ9Y241 93 aa19.77■□□□□ 0.76
RAB40C-204ENST00000538492 LOC105371242A0A075B767 164 aa19.77■□□□□ 0.75
RAB40C-204ENST00000538492 NHLH1Q02575 133 aa19.77■□□□□ 0.75
RAB40C-204ENST00000538492 C11orf71Q6IPW1 123 aa19.77■□□□□ 0.75
RAB40C-204ENST00000538492 IZUMO1RA6ND01 250 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 TPPP2P59282 170 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 SSX2Q16385 188 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 OR11H6Q8NGC7 330 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 RASL11BQ9BPW5 248 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 NCOR2Q9Y618 2525 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 PLP1P60201 277 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 PAX2Q02962 417 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 HES1Q14469 280 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 ZNF600Q6ZNG1 722 aa19.76■□□□□ 0.75
RAB40C-204ENST00000538492 WNK2Q9Y3S1 2297 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 A8MWP6 167 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 NBR2O15453 112 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 FAM231DQ6ZW35 169 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 CFHR4Q92496 578 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 Q9H3A6 140 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 Q0VG73 95 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 Q6ZWC4 215 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 MBD6Q96DN6 1003 aa19.75■□□□□ 0.75
RAB40C-204ENST00000538492 PAX1P15863 534 aa19.74■□□□□ 0.75
RAB40C-204ENST00000538492 NAGKQ9UJ70 344 aa19.74■□□□□ 0.75
RAB40C-204ENST00000538492 KLF17Q5JT82 389 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-204ENST00000538492 REC114Q7Z4M0 266 aa19.74■□□□□ 0.75
RAB40C-204ENST00000538492 SLC25A39Q9BZJ4 359 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-204ENST00000538492 MED13LQ71F56 2210 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 IGKV1-17P01599 117 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 ESDP10768 282 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 HSPB9Q9BQS6 159 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 ATG101Q9BSB4 218 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 SAMD10Q9BYL1 202 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 C7orf69Q9H7B7 122 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 ZNF331Q9NQX6 463 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-204ENST00000538492 S4R3C0 116 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 K7EIM0 57 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 SRIP30626 198 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 PAFAH1B2P68402 229 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 USF2Q15853 346 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-204ENST00000538492 NUP35Q8NFH5 326 aa19.73■□□□□ 0.75
RAB40C-204ENST00000538492 BMPR1BO00238 502 aa19.72■□□□□ 0.75
RAB40C-204ENST00000538492 HLA-DQA1P01909 254 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms