RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 TOMM40O96008 361 aa9.06□□□□□ -0.96
SPARC-207ENST00000537849 RPLP1P05386 114 aaKnown RBP9.06□□□□□ -0.96
SPARC-207ENST00000537849 RD3LP0DJH9 198 aa9.06□□□□□ -0.96
SPARC-207ENST00000537849 TCTEX1D4Q5JR98 221 aa9.06□□□□□ -0.96
SPARC-207ENST00000537849 FAM122CQ6P4D5 195 aa9.06□□□□□ -0.96
SPARC-207ENST00000537849 COMMD1Q8N668 190 aa9.06□□□□□ -0.96
SPARC-207ENST00000537849 KLHDC1Q8N7A1 406 aa9.06□□□□□ -0.96
SPARC-207ENST00000537849 RCC1LQ96I51 464 aaKnown RBP9.06□□□□□ -0.96
SPARC-207ENST00000537849 ACTR3CQ9C0K3 210 aaPredicted RBP9.06□□□□□ -0.96
SPARC-207ENST00000537849 GAR1Q9NY12 217 aaKnown RBP9.06□□□□□ -0.96
SPARC-207ENST00000537849 TEP1Q99973 2627 aaKnown RBP9.05□□□□□ -0.96
SPARC-207ENST00000537849 C2CD3Q4AC94 2353 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 TGOLN2O43493 480 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
SPARC-207ENST00000537849 TRBV12-3P01733 135 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 IGHV3-11P01762 117 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 H2AFB1P0C5Y9 115 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 GPR183P32249 361 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 CCL20P78556 96 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 SRSF2Q01130 221 aaKnown RBP9.05□□□□□ -0.96
SPARC-207ENST00000537849 SPATA31B1PQ5VZV4 182 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 OR5AU1Q8NGC0 362 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 OR4X2Q8NGF9 303 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 Q8WTZ3 238 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 GATAD1Q8WUU5 269 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 RAB24Q969Q5 203 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 C19orf24Q9BVV8 132 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 SEPSECSQ9HD40 501 aaKnown RBP9.05□□□□□ -0.96
SPARC-207ENST00000537849 MED9Q9NWA0 146 aa9.05□□□□□ -0.96
SPARC-207ENST00000537849 MRPL27Q9P0M9 148 aaKnown RBP9.05□□□□□ -0.96
SPARC-207ENST00000537849 CTXND1A0A1B0GTU2 59 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 PPP5D1E7EU14 171 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 NUPL2O15504 423 aaKnown RBP9.04□□□□□ -0.96
SPARC-207ENST00000537849 HYPMO75409 117 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 OR2C1O95371 312 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 FABP1P07148 127 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 OR5G3P0C626 314 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 LCN15Q6UWW0 184 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 SLC7A5P1Q8MH63 180 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 OR51G1Q8NGK1 321 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 OR1L4Q8NGR5 311 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 SFT2D1Q8WV19 159 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 HRH4Q9H3N8 390 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 GNB4Q9HAV0 340 aa9.04□□□□□ -0.96
SPARC-207ENST00000537849 SETD2Q9BYW2 2564 aaPredicted RBP9.04□□□□□ -0.96
SPARC-207ENST00000537849 NIPBLQ6KC79 2804 aaeCLIP9.04□□□□□ -0.96
SPARC-207ENST00000537849 ELOA3CA0A087WX78 387 aaPredicted RBP9.03□□□□□ -0.96
SPARC-207ENST00000537849 ANKRD34BA5PLL1 514 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 HMGB3O15347 200 aaKnown RBP9.03□□□□□ -0.96
SPARC-207ENST00000537849 ORM2P19652 201 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 CDC34P49427 236 aaPredicted RBP9.03□□□□□ -0.96
SPARC-207ENST00000537849 RHOBP62745 196 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 FAM78BQ5VT40 261 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 MORN5Q5VZ52 161 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 C10orf113Q5VZT2 155 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 TOMM20LQ6UXN7 152 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 ZNF600Q6ZNG1 722 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 MIR17HGQ75NE6 70 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 MARC2Q969Z3 335 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 FAM167A-AS1Q96KT0 104 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 SCRT1Q9BWW7 348 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 SLC25A22Q9H936 323 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 DOK5Q9P104 306 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 PEF1Q9UBV8 284 aaKnown RBP9.03□□□□□ -0.96
SPARC-207ENST00000537849 FUT9Q9Y231 359 aa9.03□□□□□ -0.96
SPARC-207ENST00000537849 TRAV5A0A0B4J249 113 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 IGHV3-35A0A0C4DH35 117 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 A0A1W2PPV4 95 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 MAP1LC3B2A6NCE7 125 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 TEX46H3BTG2 121 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 BMPR1BO00238 502 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 COX7A2P2O60397 106 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 STAG3L2P0CL84 134 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 STAG3L3P0CL85 134 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 ARL3P36405 182 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 CDX1P47902 265 aaPredicted RBP9.02□□□□□ -0.97
SPARC-207ENST00000537849 FGF8P55075 233 aaPredicted RBP9.02□□□□□ -0.97
SPARC-207ENST00000537849 PROK1P58294 105 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 LYZP61626 148 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 PMS2P11Q13670 270 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 OR1B1Q8NGR6 318 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 OR4F5Q8NH21 305 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 PFDN5Q99471 154 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 RNF2Q99496 336 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 MAP1LC3BQ9GZQ8 125 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 ZFAND3Q9H8U3 227 aa9.02□□□□□ -0.97
SPARC-207ENST00000537849 PUS1Q9Y606 427 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPARC-207ENST00000537849 JMJD1CQ15652 2540 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 A0A1B0GV50 99 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 CLPSL1A2RUU4 121 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 I3L521 148 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 MAST4O15021 2626 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 SCGB2A1O75556 95 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 HBE1P02100 147 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 IL4P05112 153 aa9.01□□□□□ -0.97
SPARC-207ENST00000537849 USF2Q15853 346 aaPredicted RBP9.01□□□□□ -0.97
SPARC-207ENST00000537849 FAM209BQ5JX69 171 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms