RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 FAM103A1Q9BTL3 118 aaKnown RBP12.41□□□□□ -0.42
MKS1-204ENST00000537529 NCBP2LA6PVI3 153 aaKnown RBP12.4□□□□□ -0.42
MKS1-204ENST00000537529 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.42
MKS1-204ENST00000537529 RD3LP0DJH9 198 aa12.4□□□□□ -0.42
MKS1-204ENST00000537529 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
MKS1-204ENST00000537529 TMEM11P17152 192 aa12.4□□□□□ -0.42
MKS1-204ENST00000537529 RANP62826 216 aaKnown RBP12.4□□□□□ -0.42
MKS1-204ENST00000537529 RPL19P84098 196 aaKnown RBP12.4□□□□□ -0.42
MKS1-204ENST00000537529 FBLN7Q53RD9 439 aa12.4□□□□□ -0.42
MKS1-204ENST00000537529 BPESC1Q9GZL8 116 aa12.4□□□□□ -0.42
MKS1-204ENST00000537529 COL6A6A6NMZ7 2263 aa12.4□□□□□ -0.42
MKS1-204ENST00000537529 OVOL3O00110 214 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 SLC25A5P05141 298 aaKnown RBP12.39□□□□□ -0.43
MKS1-204ENST00000537529 PDLIM4P50479 330 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 UBE2E1P51965 193 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 YPEL3P61236 119 aaPredicted RBP12.39□□□□□ -0.43
MKS1-204ENST00000537529 CX3CL1P78423 397 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 HIST1H2BLQ99880 126 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 RNASE7Q9H1E1 156 aaKnown RBP12.39□□□□□ -0.43
MKS1-204ENST00000537529 EPDR1Q9UM22 224 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 LMO4P61968 165 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 IBA57Q5T440 356 aaKnown RBP12.39□□□□□ -0.43
MKS1-204ENST00000537529 TMEM14CQ9P0S9 112 aa12.39□□□□□ -0.43
MKS1-204ENST00000537529 NBASA2RRP1 2371 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 UBE2G1P62253 170 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 PYY3Q5JQD4 70 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 BAGE2Q86Y30 109 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 LINC00479Q96M42 142 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 PACRGQ96M98 296 aaPredicted RBP12.38□□□□□ -0.43
MKS1-204ENST00000537529 TBX15Q96SF7 602 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 SLC25A39Q9BZJ4 359 aaPredicted RBP12.38□□□□□ -0.43
MKS1-204ENST00000537529 NCOR2Q9Y618 2525 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 PLXNB1O43157 2135 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 PGPA6NDG6 321 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 GOSR1O95249 250 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 TOMM40O96008 361 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 SNRPCP09234 159 aaKnown RBP12.38□□□□□ -0.43
MKS1-204ENST00000537529 FAM106CPP0CH98 169 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 GNG5P63218 68 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 TMEM183BQ1AE95 376 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 LEMD1Q68G75 181 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 OR8I2Q8N0Y5 310 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 C5orf17Q8NAS9 161 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 C1RLQ9NZP8 487 aa12.38□□□□□ -0.43
MKS1-204ENST00000537529 MRPL27Q9P0M9 148 aaKnown RBP12.38□□□□□ -0.43
MKS1-204ENST00000537529 IGLV11-55A0A075B6I3 123 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 TRAV30A0A087WSZ9 112 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 TRBV9A0A0B4J1U6 114 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 ASPHD1Q5U4P2 390 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 ZNF600Q6ZNG1 722 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 TTC9CQ8N5M4 171 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 LPAR2Q9HBW0 351 aa12.37□□□□□ -0.43
MKS1-204ENST00000537529 TRAV34A0A0B4J273 112 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 BRS3P32247 399 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 NDPQ00604 133 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 NHLRC2Q8NBF2 726 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 TMEM190Q8WZ59 177 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 SMIM12Q96EX1 92 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 ZNF48Q96MX3 618 aaPredicted RBP12.36□□□□□ -0.43
MKS1-204ENST00000537529 ATG101Q9BSB4 218 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 Q9H3A6 140 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 SERTAD4Q9NUC0 356 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
MKS1-204ENST00000537529 IGHV4-39P01824 125 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 CBLN1P23435 193 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 ADMP35318 185 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 MFAP4P55083 255 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 KLF17Q5JT82 389 aaPredicted RBP12.36□□□□□ -0.43
MKS1-204ENST00000537529 TMEM68Q96MH6 324 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 FANCD2OSQ96PS1 177 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 SHANK2-AS3Q9BTD1 123 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 OTORQ9NRC9 128 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 GSN-AS1Q9NRJ2 163 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 KLF12Q9Y4X4 402 aa12.36□□□□□ -0.43
MKS1-204ENST00000537529 HRNRQ86YZ3 2850 aaPredicted RBP12.36□□□□□ -0.43
MKS1-204ENST00000537529 HIVEP3Q5T1R4 2406 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 ZZEF1O43149 2961 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 GNG7O60262 68 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 AMBPP02760 352 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
MKS1-204ENST00000537529 COX19Q49B96 90 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 S100A7AQ86SG5 101 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 MRPL18Q9H0U6 180 aaKnown RBP12.35□□□□□ -0.43
MKS1-204ENST00000537529 THYN1Q9P016 225 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 RPH3ALQ9UNE2 315 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 RNF24Q9Y225 148 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 ARHGAP32A7KAX9 2087 aa12.35□□□□□ -0.43
MKS1-204ENST00000537529 SMIM27A0A1W2PRY6 76 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 H3BRN7 92 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 SAA4P35542 130 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 IER3P46695 156 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 WDR73Q6P4I2 378 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 RNF125Q96EQ8 232 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 FMC1Q96HJ9 113 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 CHRDL1Q9BU40 450 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 CHD8Q9HCK8 2581 aa12.34□□□□□ -0.43
MKS1-204ENST00000537529 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms