RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 DDB2Q92466 427 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF714Q96N38 554 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 C12orf49Q9H741 205 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 DUSP13Q9UII6 198 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF835Q9Y2P0 537 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 PPIAL4AQ9Y536 164 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 OR51B2Q9Y5P1 312 aa6.33□□□□□ -1.4
CPSF7-216ENST00000536548 OR4C46A6NHA9 309 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 C2orf70A6NJV1 201 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 KLRC4-KLRK1H3BQV0 150 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 PEX7O00628 323 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 CRXO43186 299 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-216ENST00000536548 CD5LO43866 347 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 LIPFP07098 398 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 CELA3AP09093 270 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 SLC35B1P78383 322 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 HIST1H1AQ02539 215 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-216ENST00000536548 SLAQ13239 276 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 EDDM3AQ14507 147 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 LTC4SQ16873 150 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 DEFB113Q30KQ7 82 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 CT83Q5H943 113 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 SPINK14Q6IE38 97 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 LCN12Q6JVE5 192 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 EBLN2Q6P2I7 272 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 FAM214BQ7L5A3 538 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 ATOH7Q8N100 152 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 DEFB125Q8N687 156 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 NHLRC2Q8NBF2 726 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 NUP35Q8NFH5 326 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 STXBP6Q8NFX7 210 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 KLF14Q8TD94 323 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-216ENST00000536548 LRRC29Q8WV35 223 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 VPS25Q9BRG1 176 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 SLC25A33Q9BSK2 321 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 FAM234AQ9H0X4 552 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 IFI27L2Q9H2X8 130 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 IDI2-AS1Q9NZ38 188 aa6.32□□□□□ -1.4
CPSF7-216ENST00000536548 AMMECR1Q9Y4X0 333 aaPredicted RBP6.32□□□□□ -1.4
CPSF7-216ENST00000536548 TRAV3A0A0B4J244 114 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 TRAV17A0A0B4J275 112 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 A0A1B0GXF2 115 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 A8MWL6 223 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 UPK2O00526 184 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 COX7A2P2O60397 106 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 PROP1O75360 226 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 MPV17P39210 176 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 HBBP68871 147 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 ALKBH6Q3KRA9 238 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 RPL39P5Q59GN2 51 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 FAM53AQ6NSI3 398 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-216ENST00000536548 Q6ZR03 302 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF826PQ6ZT77 177 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 CD177Q8N6Q3 437 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 C1orf162Q8NEQ5 155 aaPredicted RBP6.31□□□□□ -1.4
CPSF7-216ENST00000536548 NUDT10Q8NFP7 164 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF503Q96F45 646 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 NUDT11Q96G61 164 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 HINT2Q9BX68 163 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 MAP1LC3CQ9BXW4 147 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 CST9LQ9H4G1 147 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 CALYQ9NYX4 217 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF492Q9P255 531 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 CLCF1Q9UBD9 225 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 PEF1Q9UBV8 284 aaKnown RBP6.31□□□□□ -1.4
CPSF7-216ENST00000536548 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
CPSF7-216ENST00000536548 ARID1AO14497 2285 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 EML6Q6ZMW3 1958 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 FAM231BA6NCW3 169 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 SYS1-DBNDD2H3BUS1 97 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 TAX1BP3O14907 124 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CRLF1O75462 422 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 LEPROTL1O95214 131 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CELA3BP08861 270 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CD46P15529 392 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CEACAM8P31997 349 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CFHR2P36980 270 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 LOXL3P58215 753 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 LINC00205P59089 165 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 SEC11AP67812 179 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 ERHP84090 104 aaKnown RBP6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CD69Q07108 199 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 OCIAD2Q56VL3 154 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 MBNL2Q5VZF2 373 aaKnown RBP6.3□□□□□ -1.4
CPSF7-216ENST00000536548 ETFRF1Q6IPR1 90 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 PRR27Q6MZM9 219 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF329Q86UD4 541 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 CXorf67Q86X51 503 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-216ENST00000536548 VKORC1L1Q8N0U8 176 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 TPRX1Q8N7U7 411 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 TMEM158Q8WZ71 300 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 PAXXQ9BUH6 204 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 GFRA4Q9GZZ7 299 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 RPP21Q9H633 154 aaKnown RBP6.3□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF430Q9H8G1 570 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-216ENST00000536548 ZNF355PQ9NSJ1 428 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 METRNQ9UJH8 293 aa6.3□□□□□ -1.4
CPSF7-216ENST00000536548 WASHC3Q9Y3C0 194 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms