RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 TUBA4BQ9H853 241 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 ZMAT4Q9H898 229 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 ENY2Q9NPA8 101 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 HEYLQ9NQ87 328 aaPredicted RBP12.21□□□□□ -0.45
ATL3-202ENST00000535789 PSENENQ9NZ42 101 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 SMPXQ9UHP9 88 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 RYR2Q92736 4967 aa12.21□□□□□ -0.45
ATL3-202ENST00000535789 TENM2Q9NT68 2774 aa12.21□□□□□ -0.46
ATL3-202ENST00000535789 IGHV3OR16-13A0A075B7E8 117 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 IGHV3-74A0A0B4J1X5 117 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 IGHV7-4-1A0A0J9YVY3 117 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 RNF222A6NCQ9 220 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 HMSDA8MTL9 139 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 H3BP45 60 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 CHEK1O14757 476 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 TSPAN4O14817 238 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 APOHP02749 345 aaPredicted RBP12.2□□□□□ -0.46
ATL3-202ENST00000535789 RELQ04864 619 aaPredicted RBP12.2□□□□□ -0.46
ATL3-202ENST00000535789 TOMM20LQ6UXN7 152 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 TMEM14EPQ6UXP3 125 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 HYLS1Q96M11 299 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 SPATA25Q9BR10 227 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 UBQLN2Q9UHD9 624 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 AGRNO00468 2067 aa12.2□□□□□ -0.46
ATL3-202ENST00000535789 IGSF23A1L1A6 192 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 FAM24AA6NFZ4 105 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 OPRK1P41145 380 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 C2orf83Q53S99 150 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 RBPMS2Q6ZRY4 209 aaKnown RBP12.19□□□□□ -0.46
ATL3-202ENST00000535789 SLC16A13Q7RTY0 426 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 ZNF546Q86UE3 836 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 LILRB2Q8N423 598 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 AQP10Q96PS8 301 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 SPAG8Q99932 426 aaPredicted RBP12.19□□□□□ -0.46
ATL3-202ENST00000535789 GAR1Q9NY12 217 aaKnown RBP12.19□□□□□ -0.46
ATL3-202ENST00000535789 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
ATL3-202ENST00000535789 U3KQ87 197 aa12.19□□□□□ -0.46
ATL3-202ENST00000535789 CORTO00230 105 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 ARPC5O15511 151 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 CLN5O75503 358 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 IGKV1-17P01599 117 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 RPL12P30050 165 aaKnown RBP12.18□□□□□ -0.46
ATL3-202ENST00000535789 CAV2P51636 162 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 NKX2-5P52952 324 aaPredicted RBP12.18□□□□□ -0.46
ATL3-202ENST00000535789 SPANXN5Q5MJ07 72 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 FAM90A2PQ658T7 463 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 TMEM252Q8N6L7 170 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 TMEM116Q8NCL8 245 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 ST8SIA2Q92186 375 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
ATL3-202ENST00000535789 STRAPQ9Y3F4 350 aaKnown RBP12.18□□□□□ -0.46
ATL3-202ENST00000535789 PMS2P5A8MQ11 134 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 YIF1AO95070 293 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 IFNA10P01566 189 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 CXCL2P19875 107 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 NPY1RP25929 384 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 HTR2BP41595 481 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 NPBWR1P48145 328 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 EIF2B2P49770 351 aaKnown RBP12.17□□□□□ -0.46
ATL3-202ENST00000535789 SUB1P53999 127 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATL3-202ENST00000535789 EWSR1Q01844 656 aaKnown RBP eCLIP12.17□□□□□ -0.46
ATL3-202ENST00000535789 ZNF600Q6ZNG1 722 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 C9orf62Q8N4C0 152 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 MUC7Q8TAX7 377 aa12.17□□□□□ -0.46
ATL3-202ENST00000535789 PLECQ15149 4684 aaKnown RBP12.17□□□□□ -0.46
ATL3-202ENST00000535789 PRSS46E5RG02 174 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 HNRNPCP07910 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
ATL3-202ENST00000535789 METTL15P1P0C7V9 234 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 ATP5IP56385 69 aaPredicted RBP12.16□□□□□ -0.46
ATL3-202ENST00000535789 RPP30P78346 268 aaKnown RBP12.16□□□□□ -0.46
ATL3-202ENST00000535789 ZNF345Q14585 488 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 ZNF124Q15973 351 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 TIGITQ495A1 244 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 LAMTOR1Q6IAA8 161 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 ACOT7LQ6ZUV0 252 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 MFFQ9GZY8 342 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 SLC25A31Q9H0C2 315 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 HSPB11Q9Y547 144 aa12.16□□□□□ -0.46
ATL3-202ENST00000535789 IGHV3-66A0A0C4DH42 116 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 IGLC1P0CG04 106 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 SULT1A1P50225 295 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 RND2P52198 227 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 NHLH2Q02577 135 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 ARL16Q0P5N6 197 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 OR2F1Q13607 317 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 LGALSLQ3ZCW2 172 aaPredicted RBP12.15□□□□□ -0.46
ATL3-202ENST00000535789 CASC10Q5T4H9 136 aa12.15□□□□□ -0.46
ATL3-202ENST00000535789 INO80EQ8NBZ0 244 aaPredicted RBP12.15□□□□□ -0.46
ATL3-202ENST00000535789 DNAH1Q9P2D7 4330 aa12.15□□□□□ -0.47
ATL3-202ENST00000535789 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
ATL3-202ENST00000535789 CST7O76096 145 aa12.14□□□□□ -0.47
ATL3-202ENST00000535789 NUP62P37198 522 aaPredicted RBP12.14□□□□□ -0.47
ATL3-202ENST00000535789 BAXQ07812 192 aa12.14□□□□□ -0.47
ATL3-202ENST00000535789 KCNRGQ8N5I3 272 aa12.14□□□□□ -0.47
ATL3-202ENST00000535789 RNASEH2CQ8TDP1 164 aaKnown RBP12.14□□□□□ -0.47
ATL3-202ENST00000535789 PAIP2BQ9ULR5 123 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms