RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 FAM24AA6NFZ4 105 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 ZNF98A6NK75 572 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 ZNF207O43670 478 aaKnown RBP9.15□□□□□ -0.94
CHD4-203ENST00000535717 SCGB2A1O75556 95 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 YIF1AO95070 293 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 MPC2O95563 127 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 IGLV1-51P01701 117 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 CBLN1P23435 193 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 CAV2P51636 162 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 ELLP55199 621 aaPredicted RBP9.15□□□□□ -0.94
CHD4-203ENST00000535717 ARL16Q0P5N6 197 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 ACOT7LQ6ZUV0 252 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 ZFAND3Q9H8U3 227 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 LYRM2Q9NU23 88 aaPredicted RBP9.15□□□□□ -0.94
CHD4-203ENST00000535717 OR5AC2Q9NZP5 309 aa9.15□□□□□ -0.94
CHD4-203ENST00000535717 PUS1Q9Y606 427 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD4-203ENST00000535717 IGKV1D-37A0A075B6S9 117 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 IGKV1OR2-108A0A075B7D4 117 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 IGSF23A1L1A6 192 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 K7EMT4 169 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 TSPAN4O14817 238 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 CST7O76096 145 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 SNAPINO95295 136 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 RLN2P04090 185 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 C8orf88P0DMB2 117 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 YPEL3P61236 119 aaPredicted RBP9.14□□□□□ -0.95
CHD4-203ENST00000535717 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
CHD4-203ENST00000535717 OR10P1Q8NGE3 313 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 DAZ1Q9NQZ3 744 aaKnown RBP9.14□□□□□ -0.95
CHD4-203ENST00000535717 PFDN2Q9UHV9 154 aa9.14□□□□□ -0.95
CHD4-203ENST00000535717 ZFP92A6NM28 416 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 E5RGE8 158 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 G3V3Q6 166 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
CHD4-203ENST00000535717 DLK1P80370 383 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 ZNF90Q03938 601 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 DEFB114Q30KQ6 69 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 TMEM252Q8N6L7 170 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 THAP8Q8NA92 274 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 OR11H4Q8NGC9 324 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 Q8WTZ3 238 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 LINC00052Q96N35 136 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 MRPL27Q9P0M9 148 aaKnown RBP9.13□□□□□ -0.95
CHD4-203ENST00000535717 MLXQ9UH92 298 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 SELENOKQ9Y6D0 94 aa9.13□□□□□ -0.95
CHD4-203ENST00000535717 TRAV14DV4A0A0A6YYC5 116 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 SMCO3A2RU48 225 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 IZUMO1RA6ND01 250 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 FNDC10F2Z333 226 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 SMLR1H3BR10 107 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 SCAF4O95104 1147 aaKnown RBP9.12□□□□□ -0.95
CHD4-203ENST00000535717 TOMM40O96008 361 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 S100A6P06703 90 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 GIPP09681 153 aaPredicted RBP9.12□□□□□ -0.95
CHD4-203ENST00000535717 RD3LP0DJH9 198 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 PSG1P11464 419 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 P2RY1P47900 373 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 SULT1A1P50225 295 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 DEFA6Q01524 100 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 AKR1C1Q04828 323 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 SLC38A11Q08AI6 406 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 TMEM217Q8N7C4 229 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 DYNLRB2Q8TF09 96 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 TRGV9Q99603 122 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 GINS3Q9BRX5 216 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 GGACTQ9BVM4 153 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 TECRQ9NZ01 308 aaKnown RBP9.12□□□□□ -0.95
CHD4-203ENST00000535717 SMPXQ9UHP9 88 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 SORL1Q92673 2214 aa9.12□□□□□ -0.95
CHD4-203ENST00000535717 IGHV3-49A0A0A0MS15 119 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 IGHV7-4-1A0A0J9YVY3 117 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 HMSDA8MTL9 139 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 NMBP08949 121 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 PET100P0DJ07 73 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 RAP2BP61225 183 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 FGL1Q08830 312 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 OPCMLQ14982 345 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 CD300EQ496F6 205 aaPredicted RBP9.11□□□□□ -0.95
CHD4-203ENST00000535717 BTNL8Q6UX41 500 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 STX12Q86Y82 276 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
CHD4-203ENST00000535717 MBD2Q9UBB5 411 aa9.11□□□□□ -0.95
CHD4-203ENST00000535717 ZNF256Q9Y2P7 627 aaPredicted RBP9.11□□□□□ -0.95
CHD4-203ENST00000535717 IGHV3OR16-13A0A075B7E8 117 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 IGHV3-74A0A0B4J1X5 117 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 WI2-2373I1.2A0A1W2PRP0 233 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 F8W036 122 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 DNASE2O00115 360 aaPredicted RBP9.1□□□□□ -0.95
CHD4-203ENST00000535717 CHEK1O14757 476 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 APOHP02749 345 aaPredicted RBP9.1□□□□□ -0.95
CHD4-203ENST00000535717 IL4P05112 153 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 FABP1P07148 127 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 LYL1P12980 280 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 EWSR1Q01844 656 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHD4-203ENST00000535717 NHLH2Q02577 135 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 BTN1A1Q13410 526 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 OR2F1Q13607 317 aa9.1□□□□□ -0.95
CHD4-203ENST00000535717 USF2Q15853 346 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms