RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	APC2	O95996	2303 aa		3.07	□□□□□ -1.92
ATM-223	ENST00000533979	TRAV36DV7	A0A075B6V5	113 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979		A0A0J9YY10	115 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979		A0A1B0GX78	115 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	C5orf49	A4QMS7	147 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979		K7EPK0	472 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979		K7EQS6	105 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	OBSL1	O75147	1896 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	CDRT1	O95170	752 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	FN1	P02751	2386 aa	Known RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TTR	P02766	147 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	CRYBA1	P05813	215 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	PFN1	P07737	140 aa	Known RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	SEC11B	P0C7V7	166 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TRAPPC2	P0DI81	140 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TRAPPC2B	P0DI82	140 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	KDELR1	P24390	212 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	CDK2	P24941	298 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	S100A2	P29034	98 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	CASP1	P29466	404 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	GABRA2	P47869	451 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	SNRPF	P62306	86 aa	Known RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	GNG5	P63218	68 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	HLA-DRB3	P79483	266 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	SYCN	Q0VAF6	134 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TMEM267	Q0VDI3	215 aa	Predicted RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ZNF638	Q14966	1978 aa	Known RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	JOSD1	Q15040	202 aa	Predicted RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	COL5A1-AS1	Q5SY13	56 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	MORN3	Q6PF18	240 aa	Predicted RBP	3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ZNF550	Q7Z398	422 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	C11orf42	Q8N5U0	333 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TCTEX1D1	Q8N7M0	179 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ZDHHC22	Q8N966	263 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	OR51H1	Q8NH63	302 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	OR5W2	Q8NH69	310 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	OR5P3	Q8WZ94	311 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ISOC1	Q96CN7	298 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	LINC00477	Q96M19	166 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	CHCHD7	Q9BUK0	85 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	PBDC1	Q9BVG4	233 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ULBP3	Q9BZM4	244 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	LPAR5	Q9H1C0	372 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	SH3BGRL3	Q9H299	93 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	IFI27L2	Q9H2X8	130 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	OR51I2	Q9H344	312 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TAF9B	Q9HBM6	251 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	POPDC3	Q9HBV1	291 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	GPR84	Q9NQS5	396 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ACER3	Q9NUN7	267 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	MED9	Q9NWA0	146 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ANAPC11	Q9NYG5	84 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	NAT8B	Q9UHF3	227 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	PRO0461	Q9UI25	63 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	TNFSF18	Q9UNG2	199 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	LAMTOR2	Q9Y2Q5	125 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979		V9GYS6	101 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	ITPR2	Q14571	2701 aa		3.06	□□□□□ -1.92
ATM-223	ENST00000533979	MTOR	P42345	2549 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	NUP210	Q8TEM1	1887 aa	Predicted RBP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979		A0A087WUU8	490 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	IGHV3-49	A0A0A0MS15	119 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979		A0A1B0GV50	99 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	C11orf94	C9JXX5	98 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979		M0R2Z0	102 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	RBFOX2	O43251	390 aa	Known RBP eCLIP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979	PIAS1	O75925	651 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	OPN1SW	P03999	348 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	SMIM17	P0DL12	118 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	ORM2	P19652	201 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	EVI2A	P22794	236 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	CCR2	P41597	374 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	MARCKSL1	P49006	195 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	INPP1	P49441	399 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	CMC4	P56277	68 aa	Predicted RBP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979	NCS1	P62166	190 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	GNGT1	P63211	74 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	CDK6	Q00534	326 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	FABP5	Q01469	135 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	ATP5G2	Q06055	141 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	PSG7	Q13046	419 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	PMAIP1	Q13794	54 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	BATF	Q16520	125 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	IAH1	Q2TAA2	248 aa	Predicted RBP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979	ABCA11P	Q4W5N1	156 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	CLLU1	Q5K131	121 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	LDLRAD2	Q5SZI1	272 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	LINC00299	Q6ZSB3	139 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	GOLT1A	Q6ZVE7	132 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	OOSP2	Q86WS3	158 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	TMEM75	Q8N9X5	138 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	OR52L1	Q8NGH7	329 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	ZNF418	Q8TF45	676 aa	Predicted RBP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979	ACY3	Q96HD9	319 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	DERL3	Q96Q80	235 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	NDFIP1	Q9BT67	221 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	PSMG3	Q9BT73	122 aa	Predicted RBP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979	SMIM3	Q9BZL3	60 aa		3.05	□□□□□ -1.92
ATM-223	ENST00000533979	NKX6-2	Q9C056	277 aa	Predicted RBP	3.05	□□□□□ -1.92
ATM-223	ENST00000533979	EIF5A2	Q9GZV4	153 aa	Known RBP	3.05	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms