RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 PRR20CP86479 221 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 PRR20DP86480 221 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 PRR20BP86481 221 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 PRR20AP86496 221 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 ZNF506Q5JVG8 444 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 PVRIGQ6DKI7 326 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 OR1P1Q8NH06 330 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 ZNF418Q8TF45 676 aaPredicted RBP14.53□□□□□ -0.08
SMPD1-208ENST00000533123 SLC45A2Q9UMX9 530 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 F11RQ9Y624 299 aaKnown RBP14.53□□□□□ -0.08
SMPD1-208ENST00000533123 LOC102723971A0A1B0GUV8 181 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 SEC14L6B5MCN3 397 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 ATP6V0E1O15342 81 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 LINC00869P0C866 280 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 RPL29P47914 159 aaKnown RBP14.53□□□□□ -0.08
SMPD1-208ENST00000533123 NPIPB3Q92617 1050 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 KCNIP2Q9NS61 270 aa14.53□□□□□ -0.08
SMPD1-208ENST00000533123 CRLF1O75462 422 aa14.52□□□□□ -0.08
SMPD1-208ENST00000533123 BCL2P10415 239 aa14.51□□□□□ -0.09
SMPD1-208ENST00000533123 A0A1W2PPV4 95 aa14.51□□□□□ -0.09
SMPD1-208ENST00000533123 RND2P52198 227 aa14.51□□□□□ -0.09
SMPD1-208ENST00000533123 ASPHD1Q5U4P2 390 aa14.51□□□□□ -0.09
SMPD1-208ENST00000533123 GATAD1Q8WUU5 269 aa14.51□□□□□ -0.09
SMPD1-208ENST00000533123 LINC00527Q9UJ94 153 aa14.51□□□□□ -0.09
SMPD1-208ENST00000533123 SOX15O60248 233 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 OR2C1O95371 312 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 IGHG2P01859 326 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SPATA31B1PQ5VZV4 182 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SGMS2Q8NHU3 365 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 WNT10AQ9GZT5 417 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SEPSECSQ9HD40 501 aaKnown RBP14.5□□□□□ -0.09
SMPD1-208ENST00000533123 PUS1Q9Y606 427 aaKnown RBP eCLIP14.5□□□□□ -0.09
SMPD1-208ENST00000533123 IGKV1D-37A0A075B6S9 117 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 FAM181BA6NEQ2 426 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SRP19P09132 144 aaKnown RBP14.5□□□□□ -0.09
SMPD1-208ENST00000533123 CEBPGP53567 150 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 HILS1P60008 231 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 ECSCRQ19T08 205 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SOHLH1Q5JUK2 328 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SLC35E3Q7Z769 313 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 SMDT1Q9H4I9 107 aa14.5□□□□□ -0.09
SMPD1-208ENST00000533123 G3V318 75 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 MT-CO2P00403 227 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 CRYGCP07315 174 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 ZNF90Q03938 601 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 KHDC3LQ587J8 217 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 CYB561D1Q8N8Q1 229 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 SRSF8Q9BRL6 282 aaKnown RBP14.49□□□□□ -0.09
SMPD1-208ENST00000533123 NPFFR1Q9GZQ6 430 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 JMJD1CQ15652 2540 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 CLDN34H7C241 214 aa14.49□□□□□ -0.09
SMPD1-208ENST00000533123 HSPB1P04792 205 aaKnown RBP14.48□□□□□ -0.09
SMPD1-208ENST00000533123 TMEM95Q3KNT9 176 aa14.48□□□□□ -0.09
SMPD1-208ENST00000533123 UNQ5815/PRO19632Q6UWF5 114 aa14.48□□□□□ -0.09
SMPD1-208ENST00000533123 CYP2G1PQ6ZSU1 146 aa14.48□□□□□ -0.09
SMPD1-208ENST00000533123 OR5T1Q8NG75 326 aa14.48□□□□□ -0.09
SMPD1-208ENST00000533123 NOL4LQ96MY1 436 aaPredicted RBP14.48□□□□□ -0.09
SMPD1-208ENST00000533123 IFITM10A6NMD0 228 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 ARL14EPLP0DKL9 152 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 HOXA5P20719 270 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 ETFRF1Q6IPR1 90 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 PRSS22Q9GZN4 317 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 SETD2Q9BYW2 2564 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-208ENST00000533123 CORTO00230 105 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 KIAA0141Q14154 515 aaPredicted RBP14.47□□□□□ -0.09
SMPD1-208ENST00000533123 THAP8Q8NA92 274 aa14.47□□□□□ -0.09
SMPD1-208ENST00000533123 I3L2K1 104 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 IGF1P05019 195 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 RPS10P46783 165 aaKnown RBP14.46□□□□□ -0.09
SMPD1-208ENST00000533123 RHOBP62745 196 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 FAM78BQ5VT40 261 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 MIR17HGQ75NE6 70 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 ZNF702PQ9H963 129 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 VAX2Q9UIW0 290 aa14.46□□□□□ -0.09
SMPD1-208ENST00000533123 TCRBV4S1A1TA0A5B7 111 aa14.46□□□□□ -0.1
SMPD1-208ENST00000533123 GATCO43716 136 aaKnown RBP14.46□□□□□ -0.1
SMPD1-208ENST00000533123 IFNA1P01562 189 aa14.46□□□□□ -0.1
SMPD1-208ENST00000533123 RNASE1P07998 156 aaKnown RBP14.46□□□□□ -0.1
SMPD1-208ENST00000533123 STAG3L2P0CL84 134 aa14.46□□□□□ -0.1
SMPD1-208ENST00000533123 STAG3L3P0CL85 134 aa14.46□□□□□ -0.1
SMPD1-208ENST00000533123 TTC9CQ8N5M4 171 aa14.46□□□□□ -0.1
SMPD1-208ENST00000533123 TRAV41A0A0B4J266 112 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 ZNF727A8MUV8 499 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 H3BQ15 152 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 CDX1P47902 265 aaPredicted RBP14.45□□□□□ -0.1
SMPD1-208ENST00000533123 TMEM116Q8NCL8 245 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 TMEM37Q8WXS4 190 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 DOK5Q9P104 306 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 NPIPB5A8MRT5 1133 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 CD81P60033 236 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 PMS2P11Q13670 270 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 PYY3Q5JQD4 70 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 JMJD8Q96S16 334 aa14.45□□□□□ -0.1
SMPD1-208ENST00000533123 K7EIM0 57 aa14.44□□□□□ -0.1
SMPD1-208ENST00000533123 PAGE4O60829 102 aa14.44□□□□□ -0.1
SMPD1-208ENST00000533123 UBE2G2P60604 165 aa14.44□□□□□ -0.1
SMPD1-208ENST00000533123 SRSF2Q01130 221 aaKnown RBP14.44□□□□□ -0.1
SMPD1-208ENST00000533123 MEF2BQ02080 365 aaPredicted RBP14.44□□□□□ -0.1
SMPD1-208ENST00000533123 PSMB11A5LHX3 300 aa14.43□□□□□ -0.1
SMPD1-208ENST00000533123 TCF21O43680 179 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms