RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TCF24Q7RTU0 167 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 WFDC10AQ9H1F0 79 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 TUBA4BQ9H853 241 aa14.83□□□□□ -0.04
CPSF1-209ENST00000532725 METTL15P1P0C7V9 234 aa14.82□□□□□ -0.04
CPSF1-209ENST00000532725 OR8G2PQ6IF36 304 aa14.82□□□□□ -0.04
CPSF1-209ENST00000532725 ACOT7LQ6ZUV0 252 aa14.82□□□□□ -0.04
CPSF1-209ENST00000532725 OR51G1Q8NGK1 321 aa14.82□□□□□ -0.04
CPSF1-209ENST00000532725 LSM5Q9Y4Y9 91 aaKnown RBP14.82□□□□□ -0.04
CPSF1-209ENST00000532725 SIX6O95475 246 aa14.81□□□□□ -0.04
CPSF1-209ENST00000532725 HNRNPCP07910 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
CPSF1-209ENST00000532725 TMEM144Q7Z5S9 345 aa14.81□□□□□ -0.04
CPSF1-209ENST00000532725 TMEM231Q9H6L2 316 aa14.81□□□□□ -0.04
CPSF1-209ENST00000532725 RBMY1BA6NDE4 496 aaKnown RBP14.8□□□□□ -0.04
CPSF1-209ENST00000532725 RBMY1EA6NEQ0 496 aaKnown RBP14.8□□□□□ -0.04
CPSF1-209ENST00000532725 OR4C46A6NHA9 309 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 L7N2F9 121 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 FABP1P07148 127 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 RBMY1DP0C7P1 496 aaKnown RBP14.8□□□□□ -0.04
CPSF1-209ENST00000532725 VAMP2P63027 116 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 ARL16Q0P5N6 197 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 RAB32Q13637 225 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 OR10P1Q8NGE3 313 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 RNF125Q96EQ8 232 aa14.8□□□□□ -0.04
CPSF1-209ENST00000532725 IGKV3-7A0A075B6H7 116 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 GOSR2O14653 212 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 P2RY1P47900 373 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 DLK1P80370 383 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 OR2F1Q13607 317 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 C16orf54Q6UWD8 224 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 TMEM182Q6ZP80 229 aaPredicted RBP14.79□□□□□ -0.04
CPSF1-209ENST00000532725 GBGT1Q8N5D6 347 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 NARS2Q96I59 477 aaKnown RBP14.79□□□□□ -0.04
CPSF1-209ENST00000532725 CITED4Q96RK1 184 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 FAM110AQ9BQ89 295 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 SRD5A3Q9H8P0 318 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 RABAC1Q9UI14 185 aa14.79□□□□□ -0.04
CPSF1-209ENST00000532725 HUWE1Q7Z6Z7 4374 aaKnown RBP14.78□□□□□ -0.04
CPSF1-209ENST00000532725 FNDC10F2Z333 226 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 BUB3O43684 328 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 DEDDO75618 318 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 PTTG1O95997 202 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 TFPI2P48307 235 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 PAFAH1B2P68402 229 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 HAGHQ16775 308 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 ODF3L2Q3SX64 289 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 GRAMD2BQ96HH9 432 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 NMES1Q9C002 83 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 MS4A6AQ9H2W1 248 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 UBQLN2Q9UHD9 624 aa14.78□□□□□ -0.04
CPSF1-209ENST00000532725 FAM24AA6NFZ4 105 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 PVALBP20472 110 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-209ENST00000532725 S100A10P60903 97 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 RRAS2P62070 204 aaPredicted RBP14.77□□□□□ -0.05
CPSF1-209ENST00000532725 RPL11P62913 178 aaKnown RBP14.77□□□□□ -0.05
CPSF1-209ENST00000532725 AKR1C1Q04828 323 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 STPG3Q8N7X2 389 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 GLMPQ8WWB7 406 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 TM2D3Q9BRN9 247 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 PBDC1Q9BVG4 233 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 GGACTQ9BVM4 153 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 NPVFQ9HCQ7 196 aa14.77□□□□□ -0.05
CPSF1-209ENST00000532725 TRAV2A0A0B4J234 112 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 SMCO3A2RU48 225 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 CFDP00746 253 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-209ENST00000532725 GATA2P23769 480 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-209ENST00000532725 EIF2B2P49770 351 aaKnown RBP14.76□□□□□ -0.05
CPSF1-209ENST00000532725 BCAP31P51572 246 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 CMC4P56277 68 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-209ENST00000532725 H2BFSP57053 126 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 WFDC3Q8IUB2 231 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 LYRM2Q9NU23 88 aaPredicted RBP14.76□□□□□ -0.05
CPSF1-209ENST00000532725 U3KQK5 164 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 NBEAL2Q6ZNJ1 2754 aa14.76□□□□□ -0.05
CPSF1-209ENST00000532725 DNASE2O00115 360 aaPredicted RBP14.75□□□□□ -0.05
CPSF1-209ENST00000532725 SSNA1O43805 119 aa14.75□□□□□ -0.05
CPSF1-209ENST00000532725 CAV2P51636 162 aa14.75□□□□□ -0.05
CPSF1-209ENST00000532725 LYZP61626 148 aa14.75□□□□□ -0.05
CPSF1-209ENST00000532725 CYCSP99999 105 aaKnown RBP14.75□□□□□ -0.05
CPSF1-209ENST00000532725 HELTA6NFD8 242 aa14.74□□□□□ -0.05
CPSF1-209ENST00000532725 CST7O76096 145 aa14.74□□□□□ -0.05
CPSF1-209ENST00000532725 AP2S1P53680 142 aaPredicted RBP14.74□□□□□ -0.05
CPSF1-209ENST00000532725 CYP2G1PQ6ZSU1 146 aa14.74□□□□□ -0.05
CPSF1-209ENST00000532725 TMEM252Q8N6L7 170 aa14.74□□□□□ -0.05
CPSF1-209ENST00000532725 MGAT4CQ9UBM8 478 aa14.74□□□□□ -0.05
CPSF1-209ENST00000532725 K7EQG2 157 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 TEPPQ6URK8 271 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 BPIFCQ8NFQ6 507 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 DCANP1Q8TF63 244 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 ZMAT4Q9H898 229 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 PFDN2Q9UHV9 154 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 ALG5Q9Y673 324 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 STAB2Q8WWQ8 2551 aa14.73□□□□□ -0.05
CPSF1-209ENST00000532725 TENM3Q9P273 2699 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 IGSF23A1L1A6 192 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 H0YIZ8 118 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 RLN2P04090 185 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 SULT1A1P50225 295 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 SLC38A11Q08AI6 406 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 APRG1Q8IVJ8 170 aa14.72□□□□□ -0.05
CPSF1-209ENST00000532725 FAM24BQ8N5W8 94 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 165.5 ms