RNA–Protein interactions for RNA: ENST00000532279.1

PPP1CA-207, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-207ENST00000532279 TENM2Q9NT68 2774 aa16.84■□□□□ 0.29
PPP1CA-207ENST00000532279 STARD9Q9P2P6 4700 aa16.84■□□□□ 0.29
PPP1CA-207ENST00000532279 AGRNO00468 2067 aa16.84■□□□□ 0.29
PPP1CA-207ENST00000532279 IGKV1D-37A0A075B6S9 117 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 HELTA6NFD8 242 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 OR4E1P0C645 316 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 ANXA7P20073 488 aaKnown RBP16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 ZNF90Q03938 601 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 DHRS2Q13268 280 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 COQ8AQ8NI60 647 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 DCANP1Q8TF63 244 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 RNF125Q96EQ8 232 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 CIB3Q96Q77 187 aaPredicted RBP16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 PBDC1Q9BVG4 233 aa16.83■□□□□ 0.28
PPP1CA-207ENST00000532279 RPP30P78346 268 aaKnown RBP16.82■□□□□ 0.28
PPP1CA-207ENST00000532279 C4orf46Q504U0 113 aa16.82■□□□□ 0.28
PPP1CA-207ENST00000532279 STHQ8IWL8 128 aa16.82■□□□□ 0.28
PPP1CA-207ENST00000532279 C7orf50Q9BRJ6 194 aaKnown RBP16.82■□□□□ 0.28
PPP1CA-207ENST00000532279 CA1P00915 261 aaPredicted RBP16.81■□□□□ 0.28
PPP1CA-207ENST00000532279 AP2S1P53680 142 aaPredicted RBP16.81■□□□□ 0.28
PPP1CA-207ENST00000532279 EWSR1Q01844 656 aaKnown RBP eCLIP16.81■□□□□ 0.28
PPP1CA-207ENST00000532279 SPANXN5Q5MJ07 72 aa16.81■□□□□ 0.28
PPP1CA-207ENST00000532279 KNCNA6PVL3 124 aa16.8■□□□□ 0.28
PPP1CA-207ENST00000532279 H3BP45 60 aa16.8■□□□□ 0.28
PPP1CA-207ENST00000532279 BUB3O43684 328 aa16.8■□□□□ 0.28
PPP1CA-207ENST00000532279 OR2F1Q13607 317 aa16.8■□□□□ 0.28
PPP1CA-207ENST00000532279 PMS2P11Q13670 270 aa16.8■□□□□ 0.28
PPP1CA-207ENST00000532279 IFNA21P01568 189 aa16.79■□□□□ 0.28
PPP1CA-207ENST00000532279 FABP1P07148 127 aa16.79■□□□□ 0.28
PPP1CA-207ENST00000532279 LYZP61626 148 aa16.79■□□□□ 0.28
PPP1CA-207ENST00000532279 SIGLEC15Q6ZMC9 328 aa16.79■□□□□ 0.28
PPP1CA-207ENST00000532279 CXorf65A6NEN9 183 aa16.78■□□□□ 0.28
PPP1CA-207ENST00000532279 POLR2GP62487 172 aaKnown RBP eCLIP16.78■□□□□ 0.28
PPP1CA-207ENST00000532279 PSMG4Q5JS54 123 aa16.78■□□□□ 0.28
PPP1CA-207ENST00000532279 GATAD1Q8WUU5 269 aa16.78■□□□□ 0.28
PPP1CA-207ENST00000532279 RARRES2Q99969 163 aa16.78■□□□□ 0.28
PPP1CA-207ENST00000532279 STRAPQ9Y3F4 350 aaKnown RBP16.78■□□□□ 0.28
PPP1CA-207ENST00000532279 PRSS46E5RG02 174 aa16.77■□□□□ 0.28
PPP1CA-207ENST00000532279 PLA2G10O15496 165 aa16.77■□□□□ 0.28
PPP1CA-207ENST00000532279 ID3Q02535 119 aa16.77■□□□□ 0.28
PPP1CA-207ENST00000532279 OR11H2Q8NH07 326 aa16.77■□□□□ 0.28
PPP1CA-207ENST00000532279 TRGV9Q99603 122 aa16.77■□□□□ 0.28
PPP1CA-207ENST00000532279 NRN1Q9NPD7 142 aa16.77■□□□□ 0.28
PPP1CA-207ENST00000532279 DYNC2H1Q8NCM8 4307 aaKnown RBP16.77■□□□□ 0.27
PPP1CA-207ENST00000532279 IGKV1OR2-108A0A075B7D4 117 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 SNRPGP15A8MWD9 76 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 LYRM1O43325 122 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 NKX2-1P43699 371 aaPredicted RBP16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 ACTL10Q5JWF8 245 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 OR8G2PQ6IF36 304 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 TRPT1Q86TN4 253 aaKnown RBP16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 OR4D5Q8NGN0 318 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 PPP1R14BQ96C90 147 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 C20orf85Q9H1P6 137 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 PFDN2Q9UHV9 154 aa16.76■□□□□ 0.27
PPP1CA-207ENST00000532279 SSSCA1O60232 199 aa16.75■□□□□ 0.27
PPP1CA-207ENST00000532279 NUP62P37198 522 aaPredicted RBP16.75■□□□□ 0.27
PPP1CA-207ENST00000532279 AKR1C1Q04828 323 aa16.75■□□□□ 0.27
PPP1CA-207ENST00000532279 THAP8Q8NA92 274 aa16.75■□□□□ 0.27
PPP1CA-207ENST00000532279 PSENENQ9NZ42 101 aa16.75■□□□□ 0.27
PPP1CA-207ENST00000532279 JTBO76095 146 aa16.74■□□□□ 0.27
PPP1CA-207ENST00000532279 SCGB1D2O95969 90 aa16.74■□□□□ 0.27
PPP1CA-207ENST00000532279 SNRPD3P62318 126 aaKnown RBP16.74■□□□□ 0.27
PPP1CA-207ENST00000532279 CNPY1Q3B7I2 92 aa16.74■□□□□ 0.27
PPP1CA-207ENST00000532279 TMEM217Q8N7C4 229 aa16.74■□□□□ 0.27
PPP1CA-207ENST00000532279 RAB40CQ96S21 281 aa16.74■□□□□ 0.27
PPP1CA-207ENST00000532279 TRAV6A0A075B6T7 132 aa16.73■□□□□ 0.27
PPP1CA-207ENST00000532279 IAH1Q2TAA2 248 aaPredicted RBP16.73■□□□□ 0.27
PPP1CA-207ENST00000532279 ACOT7LQ6ZUV0 252 aa16.73■□□□□ 0.27
PPP1CA-207ENST00000532279 SMCO3A2RU48 225 aa16.72■□□□□ 0.27
PPP1CA-207ENST00000532279 SPP1P10451 314 aa16.72■□□□□ 0.27
PPP1CA-207ENST00000532279 C4BPBP20851 252 aa16.72■□□□□ 0.27
PPP1CA-207ENST00000532279 MITD1Q8WV92 249 aa16.72■□□□□ 0.27
PPP1CA-207ENST00000532279 GSKIPQ9P0R6 139 aa16.72■□□□□ 0.27
PPP1CA-207ENST00000532279 TCRBP04435 133 aa16.71■□□□□ 0.27
PPP1CA-207ENST00000532279 GIG44P09565 113 aaPredicted RBP16.71■□□□□ 0.27
PPP1CA-207ENST00000532279 ATF4P18848 351 aaPredicted RBP16.71■□□□□ 0.27
PPP1CA-207ENST00000532279 GATA2P23769 480 aaPredicted RBP16.71■□□□□ 0.27
PPP1CA-207ENST00000532279 MORN3Q6PF18 240 aaPredicted RBP16.71■□□□□ 0.27
PPP1CA-207ENST00000532279 SMIM8Q96KF7 97 aa16.71■□□□□ 0.27
PPP1CA-207ENST00000532279 NUPR2A6NF83 97 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 DEFB4AO15263 64 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 C1orf194Q5T5A4 169 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 GSG1LQ6UXU4 331 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 ZBTB8BQ8NAP8 495 aaPredicted RBP16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 LYSTQ99698 3801 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 CCDC32Q9BV29 185 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 NUDT15Q9NV35 164 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 FBXL17Q9UF56 701 aa16.7■□□□□ 0.26
PPP1CA-207ENST00000532279 CCSO14618 274 aa16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 CCNKO75909 580 aa16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 PAX9P55771 341 aa16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 TMEM182Q6ZP80 229 aaPredicted RBP16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 OR8I2Q8N0Y5 310 aa16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 BPIFCQ8NFQ6 507 aa16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 WDR12Q9GZL7 423 aaKnown RBP16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 SEPSECSQ9HD40 501 aaKnown RBP16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 CLEC5AQ9NY25 188 aa16.69■□□□□ 0.26
PPP1CA-207ENST00000532279 SACSQ9NZJ4 4579 aa16.68■□□□□ 0.26
PPP1CA-207ENST00000532279 PMS2P5A8MQ11 134 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms