RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 GP9P14770 177 aa13.71□□□□□ -0.21
BRCA2-204ENST00000530893 REC114Q7Z4M0 266 aa13.71□□□□□ -0.21
BRCA2-204ENST00000530893 MBD6Q96DN6 1003 aa13.71□□□□□ -0.21
BRCA2-204ENST00000530893 C14orf144Q96I85 54 aa13.71□□□□□ -0.21
BRCA2-204ENST00000530893 PRO1933Q9H354 126 aa13.71□□□□□ -0.21
BRCA2-204ENST00000530893 A0A1B0GUS0 222 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 I3L2K1 104 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 HIST1H1EP10412 219 aaKnown RBP13.71□□□□□ -0.22
BRCA2-204ENST00000530893 BAGE3Q86Y29 109 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 C5orf17Q8NAS9 161 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 WIPF2Q8TF74 440 aaPredicted RBP13.71□□□□□ -0.22
BRCA2-204ENST00000530893 GRAMD2BQ96HH9 432 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 ATG101Q9BSB4 218 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 HIGD1AQ9Y241 93 aa13.71□□□□□ -0.22
BRCA2-204ENST00000530893 A8MWP6 167 aa13.7□□□□□ -0.22
BRCA2-204ENST00000530893 TIMM23O14925 209 aa13.7□□□□□ -0.22
BRCA2-204ENST00000530893 SERF1AO75920 110 aa13.7□□□□□ -0.22
BRCA2-204ENST00000530893 SLC25A5P05141 298 aaKnown RBP13.7□□□□□ -0.22
BRCA2-204ENST00000530893 APELAP0DMC3 54 aa13.7□□□□□ -0.22
BRCA2-204ENST00000530893 C11orf71Q6IPW1 123 aa13.7□□□□□ -0.22
BRCA2-204ENST00000530893 RBM14Q96PK6 669 aaKnown RBP13.7□□□□□ -0.22
BRCA2-204ENST00000530893 TMEM14CQ9P0S9 112 aa13.7□□□□□ -0.22
BRCA2-204ENST00000530893 PGPA6NDG6 321 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 PRB3Q04118 309 aaPredicted RBP13.69□□□□□ -0.22
BRCA2-204ENST00000530893 NHLRC2Q8NBF2 726 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 NPBQ8NG41 125 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 FMC1Q96HJ9 113 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 GPR82Q96P67 336 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 RASL11BQ9BPW5 248 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 NBR2O15453 112 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 CNIH1O95406 144 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 SCGB1D1O95968 90 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 FRMD6-AS1P0C7T7 363 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 TCL1AP56279 114 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 LINC00310P59036 64 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 MMDQ15546 238 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 USF2Q15853 346 aaPredicted RBP13.69□□□□□ -0.22
BRCA2-204ENST00000530893 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 NUDT10Q8NFP7 164 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 BLNKQ8WV28 456 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 NUDT11Q96G61 164 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 SSBP3Q9BWW4 388 aaPredicted RBP13.69□□□□□ -0.22
BRCA2-204ENST00000530893 WNT10AQ9GZT5 417 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 C7orf69Q9H7B7 122 aa13.69□□□□□ -0.22
BRCA2-204ENST00000530893 ZNF331Q9NQX6 463 aaPredicted RBP13.69□□□□□ -0.22
BRCA2-204ENST00000530893 NDUFA3O95167 84 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 PSG1P11464 419 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 PRTN3P24158 256 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 CFHR4Q92496 578 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 NAGKQ9UJ70 344 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 LOC105371242A0A075B767 164 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 ODF3BA8MYP8 253 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 TOMM40O96008 361 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 BRS3P32247 399 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 ARF6P62330 175 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 CDSNQ15517 529 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 C1orf122Q6ZSJ8 110 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 TSKUQ8WUA8 353 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 MLST8Q9BVC4 326 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 RNF24Q9Y225 148 aa13.68□□□□□ -0.22
BRCA2-204ENST00000530893 IGHV3-21A0A0B4J1V1 117 aa13.67□□□□□ -0.22
BRCA2-204ENST00000530893 SPINK4O60575 86 aa13.67□□□□□ -0.22
BRCA2-204ENST00000530893 GPR6P46095 362 aaPredicted RBP13.67□□□□□ -0.22
BRCA2-204ENST00000530893 LBHQ53QV2 105 aaPredicted RBP13.67□□□□□ -0.22
BRCA2-204ENST00000530893 LDLRAD2Q5SZI1 272 aa13.67□□□□□ -0.22
BRCA2-204ENST00000530893 TMEM68Q96MH6 324 aa13.67□□□□□ -0.22
BRCA2-204ENST00000530893 GNB4Q9HAV0 340 aa13.67□□□□□ -0.22
BRCA2-204ENST00000530893 GNG5P63218 68 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 SLC35B1P78383 322 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 MRPL54Q6P161 138 aaKnown RBP13.66□□□□□ -0.22
BRCA2-204ENST00000530893 ZNF600Q6ZNG1 722 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 ATP5L2Q7Z4Y8 100 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 FAM168AQ92567 244 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 SLC25A39Q9BZJ4 359 aaPredicted RBP13.66□□□□□ -0.22
BRCA2-204ENST00000530893 Q9H3A6 140 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 MRPL27Q9P0M9 148 aaKnown RBP13.66□□□□□ -0.22
BRCA2-204ENST00000530893 CA1P00915 261 aaPredicted RBP13.66□□□□□ -0.22
BRCA2-204ENST00000530893 LTAP01374 205 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 TCRAP04437 139 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 LYZP61626 148 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 CT83Q5H943 113 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 DTX2Q86UW9 622 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 KIR3DL3Q8N743 410 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 NDUFAF3Q9BU61 184 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 OTORQ9NRC9 128 aa13.66□□□□□ -0.22
BRCA2-204ENST00000530893 OOSP1A8MZH6 123 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 K7EIM0 57 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 BMPR1BO00238 502 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 APCSP02743 223 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 CCDC144NLQ6NUI1 221 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 NUP35Q8NFH5 326 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 SAMD10Q9BYL1 202 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 ZNF492Q9P255 531 aa13.65□□□□□ -0.22
BRCA2-204ENST00000530893 LY6HO94772 140 aa13.64□□□□□ -0.23
BRCA2-204ENST00000530893 IGKV1-17P01599 117 aa13.64□□□□□ -0.23
BRCA2-204ENST00000530893 C1orf194Q5T5A4 169 aa13.64□□□□□ -0.23
BRCA2-204ENST00000530893 GSX1Q9H4S2 264 aaPredicted RBP13.64□□□□□ -0.23
BRCA2-204ENST00000530893 ZMAT5Q9UDW3 170 aaKnown RBP13.64□□□□□ -0.23
BRCA2-204ENST00000530893 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms