RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TCF19Q9Y242 345 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 LINC00473A8K010 186 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 C5orf67F2Z3F1 127 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 GAGE7O76087 117 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 GAGE4Q13068 117 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-214ENST00000530886 U3KQK5 164 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 DYSFO75923 2080 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 FABP5P3A8MUU1 101 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 K7ERJ3 54 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 MEOX1P50221 254 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF138P52744 262 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 OR5AN1Q8NGI8 311 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 RLN3Q8WXF3 142 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 PRELID3AQ96N28 172 aa6.57□□□□□ -1.36
CSDE1-214ENST00000530886 NDUFS7O75251 213 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 OR2H2O95918 312 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF542PQ5EBM4 170 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 TEX29Q8N6K0 151 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 FOXB1Q99853 325 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM140Q9NV12 185 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 CHCHD2Q9Y6H1 151 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM8BA6NDV4 472 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 NPIPB5A8MRT5 1133 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 C16orf97H3BN30 126 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 ACTL6BO94805 426 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 LTAP01374 205 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 B4GALT1P15291 398 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 GNG3P63215 75 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 PLGLB1Q02325 96 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 C12orf74Q32Q52 190 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 NFE4Q86UQ8 179 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF808Q8N4W9 903 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM116Q8NCL8 245 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF714Q96N38 554 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 RAB1BQ9H0U4 201 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 IGHV3-20A0A0C4DH32 117 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 OOEPA6NGQ2 149 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM262E9PQX1 116 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 J3QT63 122 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 EVI2AP22794 236 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 CD24P25063 80 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-214ENST00000530886 CACNG7P62955 275 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 SLC25A48Q6ZT89 311 aaKnown RBP6.56□□□□□ -1.36
CSDE1-214ENST00000530886 SBSPONQ8IVN8 264 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM178AQ8NBL3 297 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF414Q96IQ9 312 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 UCN2Q96RP3 112 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 HINT2Q9BX68 163 aa6.56□□□□□ -1.36
CSDE1-214ENST00000530886 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
CSDE1-214ENST00000530886 FOXA2Q9Y261 457 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-214ENST00000530886 C5orf49A4QMS7 147 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 KLK10O43240 276 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 CNIH1O95406 144 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 DSCR4P56555 118 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF493Q6ZR52 646 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 PGLYRP4Q96LB8 373 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 ZNF488Q96MN9 340 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 A0A1W2PQM1 296 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM30CPA0ZSE6 113 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 C15orf61A6NNL5 157 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 C12orf77C9JDV5 145 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 P01737 135 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 NMUP48645 174 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 UBE2L3P68036 154 aaKnown RBP6.55□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM158Q8WZ71 300 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 FMC1Q96HJ9 113 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 BRWD1Q9NSI6 2320 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 TRBV25-1A0A075B6N4 114 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 M0QXV9 152 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 KIR2DS2P43631 304 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 IGF2-ASQ6U949 168 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 ITLN1Q8WWA0 313 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 HHLA3Q9XRX5 114 aa6.55□□□□□ -1.36
CSDE1-214ENST00000530886 PRSS29PA6NIE9 313 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 IGLV3-19P01714 112 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 HBDP02042 147 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 RBP4P02753 201 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 NDUFV3P56181 108 aaKnown RBP6.54□□□□□ -1.36
CSDE1-214ENST00000530886 TCTAP57738 103 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 PRR30Q53SZ7 412 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-214ENST00000530886 OR8A1Q8NGG7 326 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 RPEQ96AT9 228 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 SRXN1Q9BYN0 137 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 TMEM14BQ9NUH8 114 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 OCIAD1Q9NX40 245 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 VPREB3Q9UKI3 123 aa6.54□□□□□ -1.36
CSDE1-214ENST00000530886 TRBV6-1A0A0K0K1D8 114 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms